RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
USP30-201ENST00000257548 GPR32O75388 356 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ERAL1O75616 437 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 KCNK5O95279 499 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 DNASE1P24855 282 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 LARS2Q15031 903 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 TCEA2Q15560 299 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ESCO2Q56NI9 601 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 TRMT11Q7Z4G4 463 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 UFD1Q92890 307 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 PGAP3Q96FM1 320 aaPredicted RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 MYO19Q96H55 970 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 MCMBPQ9BTE3 642 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 MND1Q9BWT6 205 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 RBCK1Q9BYM8 510 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 SAP130Q9H0E3 1048 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ELAC1Q9H777 363 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 EQTNQ9NQ60 294 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 HCN3Q9P1Z3 774 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 LRFN2Q9ULH4 789 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 GABRQQ9UN88 632 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 RWDD3Q9Y3V2 267 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 PCDHGB2Q9Y5G2 931 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ALPK2Q86TB3 2170 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 TRIM64A6NGJ6 449 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 H3BQ06 376 aaPredicted RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 PGRMC2O15173 223 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 JUNDP17535 347 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 PTGER1P34995 402 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 RPL35P42766 123 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 TEAD4Q15561 434 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 BPHLQ86WA6 291 aaPredicted RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 NPAS3Q8IXF0 933 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 KLHDC9Q8NEP7 349 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 OR52P1PQ8NH57 321 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 EXOSC8Q96B26 276 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 CCDC115Q96NT0 180 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 DIABLOQ9NR28 239 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 KCNN3Q9UGI6 736 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 TBC1D24Q9ULP9 559 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 SSC5DA1L4H1 1573 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 PROS1P07225 676 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 RPL17P18621 184 aaKnown RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 RPS26P11Q5JNZ5 115 aaPredicted RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 SLX4IPQ5VYV7 408 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ZNF767PQ75MW2 155 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 CCDC71Q8IV32 467 aaPredicted RBP11.83□□□□□ -0.52
USP30-201ENST00000257548 MEIOBQ8N635 442 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 OR2T35Q8NGX2 323 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 LKAAEAR1Q8TD35 194 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 C1QTNF6Q9BXI9 259 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ZDHHC6Q9H6R6 413 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 TMEM138Q9NPI0 162 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 TMEM248Q9NWD8 314 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 ELOVL2Q9NXB9 296 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 SLC23A1Q9UHI7 598 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 PADI3Q9ULW8 664 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 STUB1Q9UNE7 303 aa11.83□□□□□ -0.52
USP30-201ENST00000257548 COL11A1P12107 1806 aaPredicted RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 LOC285095A0A1B0GVY8 99 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 H3BSH0 61 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 GATBO75879 557 aaKnown RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 IFNA7P01567 189 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 STATHP02808 62 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 CKMP06732 381 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 MMP2P08253 660 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 ALPPL2P10696 532 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 HLA-EP13747 358 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 STOMP27105 288 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 CORO1AP31146 461 aaKnown RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 HOXA9P31269 272 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 KIR2DL3P43628 341 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 FNTBP49356 437 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 MC1RQ01726 317 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 CHRNEQ04844 493 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 EFR3AQ14156 821 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 GINS1Q14691 196 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 GPR162Q16538 588 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 ZNF791Q3KP31 576 aaPredicted RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 HIST2H2AA3Q6FI13 130 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 ARL9Q6T311 187 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 CERS6Q6ZMG9 384 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 SLC30A8Q8IWU4 369 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 ZNF433Q8N7K0 673 aaPredicted RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 BOLLQ8N9W6 283 aaKnown RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 NLGN4YQ8NFZ3 816 aaPredicted RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 HYLS1Q96M11 299 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 NDRG2Q9UN36 371 aaKnown RBP11.82□□□□□ -0.52
USP30-201ENST00000257548 PRSS21Q9Y6M0 314 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 ARHGEF33A8MVX0 844 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 UGT2B10P36537 528 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 ARHGDIBP52566 201 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 TSPAN5P62079 268 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 IHHQ14623 411 aa11.82□□□□□ -0.52
USP30-201ENST00000257548 FCN2Q15485 313 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms