RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 WNT7BP56706 349 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 ZNF627Q7L945 461 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 LRRC25Q8N386 305 aaPredicted RBP18.23■□□□□ 0.51
PTPRE-201ENST00000254667 FOXJ1Q92949 421 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 B3GNT4Q9C0J1 378 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 EURLQ9NYK6 297 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 PCDHB14Q9Y5E9 798 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 METTL21EPA6NDL7 271 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 BLOC1S5-TXNDC5H3BN57 136 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 HPRP00739 348 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 ADRB3P13945 408 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 CD72P21854 359 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 SCRN3Q0VDG4 424 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 TSTQ16762 297 aaKnown RBP18.23■□□□□ 0.51
PTPRE-201ENST00000254667 CARM1Q86X55 608 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 ANKLE1Q8NAG6 615 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 IL21RQ9HBE5 538 aa18.23■□□□□ 0.51
PTPRE-201ENST00000254667 CCDC59Q9P031 241 aaKnown RBP18.23■□□□□ 0.51
PTPRE-201ENST00000254667 NAV1Q8NEY1 1877 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 LILRB3O75022 631 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 MT-ND5P03915 603 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 CLUP10909 449 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 SLC2A2P11168 524 aaPredicted RBP18.22■□□□□ 0.51
PTPRE-201ENST00000254667 SRCP12931 536 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ITIH1P19827 911 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 GLDCP23378 1020 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ECHS1P30084 290 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 NUDT6P53370 316 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 MOGSQ13724 837 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 GRB7Q14451 532 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 NADK2Q4G0N4 442 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ZNF773Q6PK81 442 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 MINDY1Q8N5J2 469 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 OR4C15Q8NGM1 316 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 PCDHGB6Q9Y5F9 930 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ADAMTSL3P82987 1691 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 TOR1BO14657 336 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ID2Q02363 134 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 TMEM25Q86YD3 366 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 NKX1-2Q9UD57 310 aaPredicted RBP18.22■□□□□ 0.51
PTPRE-201ENST00000254667 AASSQ9UDR5 926 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ZNF639Q9UID6 485 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 J3QLW9 94 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 TBX1O43435 398 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 TRAPPC6AO75865 159 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 CH25HO95992 272 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ZNF19P17023 458 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 CLDN8P56748 225 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 PPP1R8Q12972 351 aaKnown RBP18.22■□□□□ 0.51
PTPRE-201ENST00000254667 CDKL4Q5MAI5 379 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 CRTC1Q6UUV9 634 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 CSNK1A1LQ8N752 337 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 PIAS3Q9Y6X2 628 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 MAU2Q9Y6X3 613 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ABCB7O75027 752 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 PPM1BO75688 479 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 RPP14O95059 124 aaKnown RBP18.22■□□□□ 0.51
PTPRE-201ENST00000254667 HTR1AP08908 422 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ABRAXAS2Q15018 415 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 KANK2Q63ZY3 851 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 ZNF852Q6ZMS4 543 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 SCD5Q86SK9 330 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 SLC39A11Q8N1S5 342 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 FANK1Q8TC84 345 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 MR1Q95460 341 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 SLC17A9Q9BYT1 436 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 NOX1Q9Y5S8 564 aa18.22■□□□□ 0.51
PTPRE-201ENST00000254667 HYKKA2RU49 373 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 WASH4PA8MWX3 477 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 RLN2P04090 185 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 FBLP22087 321 aaKnown RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 ITGA3P26006 1051 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 VIPR2P41587 438 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 CDHR3Q6ZTQ4 885 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 THEM6Q8WUY1 208 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 PIP5K1AQ99755 562 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 NKX2-4Q9H2Z4 354 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 PCDHB16Q9NRJ7 776 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 MALT1Q9UDY8 824 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 OR12D1P0DN82 309 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 MADCAM1Q13477 382 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 SORCS1Q8WY21 1168 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 TBC1D24Q9ULP9 559 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 IRS2Q9Y4H2 1338 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 GRXCR1A8MXD5 290 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 CLEC3AO75596 197 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 RAB28P51157 221 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 ARF5P84085 180 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 ABCA11PQ4W5N1 156 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 ZNF548Q8NEK5 533 aaPredicted RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 RELTQ969Z4 430 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 ORAI3Q9BRQ5 295 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 TMEM184CQ9NVA4 438 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 MGAT4AQ9UM21 535 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 SOX14O95416 240 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 CSTBP04080 98 aaKnown RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 GABRA3P34903 492 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 RABIFP47224 123 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms