RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 KIAA1614Q5VZ46 1190 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 KIAA0895LQ68EN5 471 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 CCDC80Q76M96 950 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 SATL1Q86VE3 508 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 FAM20CQ8IXL6 584 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 ZNF555Q8NEP9 628 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 FLCNQ8NFG4 579 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 OR2L5Q8NG80 312 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 CCL4L1Q8NHW4 92 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 ZFPM2Q8WW38 1151 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 MS4A6EQ96DS6 147 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 NRBF2Q96F24 287 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 YIPF3Q9GZM5 350 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 GABARAPL1Q9H0R8 117 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 CXorf36Q9H7Y0 433 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 TUBA8Q9NY65 449 aaPredicted RBP22.13■■□□□ 1.13
MSX2-201ENST00000239243 SNX8Q9Y5X2 465 aa22.13■■□□□ 1.13
MSX2-201ENST00000239243 TNFP01375 233 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 SLC19A1P41440 591 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 ITGA1P56199 1179 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 SELENOWP63302 87 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 CDK6Q00534 326 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 CHRDL2Q6WN34 429 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 ARL10Q8N8L6 244 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 LZICQ8WZA0 190 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 NEURL3Q96EH8 262 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 TOR3AQ9H497 397 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 EPS8L2Q9H6S3 715 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 SMURF2Q9HAU4 748 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 TEX10Q9NXF1 929 aaPredicted RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 ANGPT4Q9Y264 503 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 PADI2Q9Y2J8 665 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 ERI3O43414 337 aaKnown RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 DNAJA1P31689 397 aaKnown RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 NUDT1P36639 197 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 STXBP1P61764 594 aaKnown RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 RPS15AP62244 130 aaKnown RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 VLDLRP98155 873 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 TGM3Q08188 693 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 ZIK1Q3SY52 487 aaPredicted RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 OFCC1Q8IZS5 231 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 GRIP2Q9C0E4 1043 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 C6orf106Q9H6K1 298 aaPredicted RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 UBE2ZQ9H832 354 aaPredicted RBP22.12■■□□□ 1.13
MSX2-201ENST00000239243 U3KQV3 271 aa22.12■■□□□ 1.13
MSX2-201ENST00000239243 UNC80Q8N2C7 3258 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 hCG_2039718K7EN88 272 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 HS6ST1O60243 411 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 SEC24DO94855 1032 aaPredicted RBP22.11■■□□□ 1.13
MSX2-201ENST00000239243 CLIC3O95833 236 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 IGHV4-34P06331 123 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 ARAFP10398 606 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 FPR1P21462 350 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 AQP1P29972 269 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 DSTNP60981 165 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 TFF2Q03403 129 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 HYAL2Q12891 473 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 SAXO2Q658L1 398 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 ABHD17CQ6PCB6 329 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 TMEM179BQ7Z7N9 219 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 EXOSC8Q96B26 276 aaKnown RBP22.11■■□□□ 1.13
MSX2-201ENST00000239243 GAS2L1Q99501 681 aaPredicted RBP22.11■■□□□ 1.13
MSX2-201ENST00000239243 PNMA8BQ9ULN7 279 aaPredicted RBP22.11■■□□□ 1.13
MSX2-201ENST00000239243 PLXND1Q9Y4D7 1925 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 A0A087WXM4 84 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 ZW10O43264 779 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 HIST1H1TP22492 207 aaPredicted RBP22.11■■□□□ 1.13
MSX2-201ENST00000239243 CRYBA2P53672 197 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 KCNJ10P78508 379 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 TDGQ13569 410 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 PLCL1Q15111 1095 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 TCEA2Q15560 299 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 NDUFAF5Q5TEU4 345 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 SYT13Q7L8C5 426 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 TRIM48Q8IWZ4 208 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 HS3ST5Q8IZT8 346 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 OR13H1Q8NG92 308 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 NFKBIDQ8NI38 313 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 JPH3Q8WXH2 748 aaPredicted RBP22.11■■□□□ 1.13
MSX2-201ENST00000239243 AICDAQ9GZX7 198 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 ABCG4Q9H172 646 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 PRO3102Q9H379 93 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 REEP1Q9H902 201 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 SLAMF7Q9NQ25 335 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 ZSCAN32Q9NX65 697 aa22.11■■□□□ 1.13
MSX2-201ENST00000239243 EME2A4GXA9 379 aaPredicted RBP22.1■■□□□ 1.13
MSX2-201ENST00000239243 EEF1A2Q05639 463 aaKnown RBP22.1■■□□□ 1.13
MSX2-201ENST00000239243 LRIT3Q3SXY7 679 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 NADK2Q4G0N4 442 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 ZC3H12BQ5HYM0 836 aaKnown RBP22.1■■□□□ 1.13
MSX2-201ENST00000239243 TJAP1Q5JTD0 557 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 TOR1AIP1Q5JTV8 583 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 ZNF793Q6ZN11 406 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 Q6ZS52 159 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 PAQR7Q86WK9 346 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 NRROSQ86YC3 692 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 PSMA8Q8TAA3 256 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 TOE1Q96GM8 510 aaKnown RBP22.1■■□□□ 1.13
MSX2-201ENST00000239243 KLHL31Q9H511 634 aa22.1■■□□□ 1.13
MSX2-201ENST00000239243 SOX17Q9H6I2 414 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms