RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 IFNA10P01566 189 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 OPN1SWP03999 348 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 IFNA4P05014 189 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 FOSL1P15407 271 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 RAB3BP20337 219 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 FRKP42685 505 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 CREB3L2Q70SY1 520 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 UPF1Q92900 1129 aaKnown RBP eCLIP7.92□□□□□ -1.14
APOB-201ENST00000233242 OR2M2Q96R28 347 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 INTS6Q9UL03 887 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 INCA1Q0VD86 236 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PRAMEF14Q5SWL7 426 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 LIPJQ5W064 366 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 METAP1DQ6UB28 335 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 POGLUT1Q8NBL1 392 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 TBC1D15Q8TC07 691 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SMPDL3AQ92484 453 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 RTP4Q96DX8 246 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CNN2Q99439 309 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 FZD8Q9H461 694 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 YJEFN3A6XGL0 299 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 J3KR12 359 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 MMP20O60882 483 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 NR4A2P43354 598 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PPP1R3AQ16821 1122 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 AMZ2Q86W34 360 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 OR10G6Q8NH81 332 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 REEP4Q9H6H4 257 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 A0A1W2PQL4 384 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 SCGB1D2O95969 90 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 Q6ZNX1 250 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CPNE8Q86YQ8 564 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 GIMAP5Q96F15 307 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 EVLQ9UI08 416 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 MRPS23Q9Y3D9 190 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 H3BUI4 141 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 GPR25O00155 361 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SSX4O60224 188 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CYP17A1P05093 508 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 DPP6P42658 865 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 MECP2P51608 486 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 CHST9Q7L1S5 443 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PIM3Q86V86 326 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 OR4C15Q8NGM1 316 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 RHOXF1Q8NHV9 184 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 BEX1Q9HBH7 125 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PIGVQ9NUD9 493 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 ABCC6O95255 1503 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SEPT4O43236 478 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 MMP12P39900 470 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CD244Q9BZW8 370 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 HHATLQ9HCP6 504 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PLD6Q8N2A8 252 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 SYT14Q8NB59 555 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SECISBP2Q96T21 854 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 EIF5A2Q9GZV4 153 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 MEIOCA2RUB1 952 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 UNC119BA6NIH7 251 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 NARSO43776 548 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 BCKDHAP12694 445 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 HMGN3Q15651 99 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 TECRLQ5HYJ1 363 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 AKR1C8PQ5T2L2 129 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SDHAF4Q5VUM1 108 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CASTOR1Q8WTX7 329 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 DDX1Q92499 740 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 NDRG1Q92597 394 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 OR51E2Q9H255 320 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CNOT2Q9NZN8 540 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 ATRNL1Q5VV63 1379 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 AHCYP23526 432 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 DIO3P55073 304 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 TAS2R31P59538 309 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 GSG1LQ6UXU4 331 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 OR6K2Q8NGY2 324 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SMAP2Q8WU79 429 aaPredicted RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 NIPAL2Q9H841 368 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 LAMP5Q9UJQ1 280 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CDC7O00311 574 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 INPPL1O15357 1258 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 TOXO94900 526 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CD1DP15813 335 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 CXCR1P25024 350 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SLC5A2P31639 672 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PITPNBP48739 271 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 RAP2BP61225 183 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 ZNF33BQ06732 778 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 PLAG1Q6DJT9 500 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 SUN3Q8TAQ9 357 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 WDR6Q9NNW5 1121 aaKnown RBP7.92□□□□□ -1.14
APOB-201ENST00000233242 PCDHGA7Q9Y5G6 932 aa7.92□□□□□ -1.14
APOB-201ENST00000233242 STSP08842 583 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SLC35E2BP0CK96 405 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 HLA-EP13747 358 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ENDOUP21128 410 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 KCNJ8Q15842 424 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 UAP1L1Q3KQV9 507 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ESAMQ96AP7 390 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 TCRBV3S1A0A5B6 114 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CLDN24A6NM45 220 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms