RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 CYP20A1Q6UW02 462 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 RGS9BPQ6ZS82 235 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 WDR75Q8IWA0 830 aaKnown RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 ZC3H7AQ8IWR0 971 aaKnown RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 SPACA3Q8IXA5 215 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 ZCCHC7Q8N3Z6 543 aaKnown RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 PIWIL2Q8TC59 973 aaKnown RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 KIAA1143Q96AT1 154 aaPredicted RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 MIEF2Q96C03 454 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 C19orf60Q96EN9 201 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 SPSB2Q99619 263 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 NPLQ9BXD5 320 aaPredicted RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 ACTL8Q9H568 366 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 KCMF1Q9P0J7 381 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 TCFL5Q9UL49 500 aa14.16□□□□□ -0.14
RPA3-201ENST00000223129 PTRH2Q9Y3E5 179 aaKnown RBP14.16□□□□□ -0.14
RPA3-201ENST00000223129 CFAP47Q6ZTR5 3102 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 LSM1O15116 133 aaKnown RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 EFSO43281 561 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 PEX11AO75192 247 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 EFNA3P52797 238 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 KLC1Q07866 573 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 KIAA0040Q15053 153 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 RFTN2Q52LD8 501 aaPredicted RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 VWA5B1Q5TIE3 1220 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 PAGE2Q7Z2X7 111 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 FAM47BQ8NA70 645 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 C11orf24Q96F05 449 aaPredicted RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 CSF3RQ99062 836 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 EBPLQ9BY08 206 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 GPR87Q9BY21 358 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 LRTM1Q9HBL6 345 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 KCND3Q9UK17 655 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 ADAM21Q9UKJ8 722 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 ATG4BQ9Y4P1 393 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 POLR3HQ9Y535 204 aaPredicted RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 RRP8O43159 456 aaKnown RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 B4GALT2O60909 372 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 FAM58BPP0C7Q3 252 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 RNH1P13489 461 aaKnown RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 PRPH2P23942 346 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 ITPKBP27987 946 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 HNRNPFP52597 415 aaKnown RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 RAB38P57729 211 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 SPIN4Q56A73 249 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 MFSD4BQ5TF39 518 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 MRM1Q6IN84 353 aaKnown RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 TMEM52Q8NDY8 209 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 UCN3Q969E3 161 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 TBC1D20Q96BZ9 403 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 TGIF2Q9GZN2 237 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 CLK4Q9HAZ1 481 aaKnown RBP14.15□□□□□ -0.14
RPA3-201ENST00000223129 C1orf109Q9NX04 203 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 ADAM29Q9UKF5 820 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 ASB4Q9Y574 426 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 PCDHGA6Q9Y5G7 932 aa14.15□□□□□ -0.14
RPA3-201ENST00000223129 ARHGAP10A1A4S6 786 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 PSMD12O00232 456 aaPredicted RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 HDAC3O15379 428 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 PRKRAO75569 313 aaKnown RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 UMODP07911 640 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 FHP07954 510 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 MINDY4Q4G0A6 757 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 C18orf63Q68DL7 685 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 MAVSQ7Z434 540 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 GPR180Q86V85 440 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 HOMEZQ8IX15 550 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 KIRREL3Q8IZU9 778 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 EFCAB3Q8N7B9 438 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 TUBGCP3Q96CW5 907 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 CCNL2Q96S94 520 aaPredicted RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 WDR54Q9H977 334 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 LYRM4Q9HD34 91 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 LANCL2Q9NS86 450 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 MKL2Q9ULH7 1088 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 GNG14A0A1W2PPG7 69 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 WASHC1A8K0Z3 465 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 NPIPB8E9PQR5 432 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 CYR61O00622 381 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 ZNF195O14628 629 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 PCDH7O60245 1069 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 CPN2P22792 545 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 TIA1P31483 386 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPA3-201ENST00000223129 FOLR3P41439 243 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 HK2P52789 917 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 MAPK12P53778 367 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 RPL38P63173 70 aaKnown RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 BTG2P78543 158 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 KDF1Q8NAX2 398 aaPredicted RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 OR2Y1Q8NGV0 311 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 THOC1Q96FV9 657 aaKnown RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 CCT7Q99832 543 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 MESP1Q9BRJ9 268 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 WDR55Q9H6Y2 383 aaPredicted RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 AKTIPQ9H8T0 292 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 MEAF6Q9HAF1 191 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 TEX10Q9NXF1 929 aaPredicted RBP14.14□□□□□ -0.15
RPA3-201ENST00000223129 MCM8Q9UJA3 840 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 PADI2Q9Y2J8 665 aa14.14□□□□□ -0.15
RPA3-201ENST00000223129 GOLGA8QA0A0J9YX86 632 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms