RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 WDR54Q9H977 334 aa25.15■■□□□ 1.62
STUB1-201ENST00000219548 CLK4Q9HAZ1 481 aaKnown RBP25.15■■□□□ 1.62
STUB1-201ENST00000219548 LRTM1Q9HBL6 345 aa25.15■■□□□ 1.62
STUB1-201ENST00000219548 KCND3Q9UK17 655 aa25.15■■□□□ 1.62
STUB1-201ENST00000219548 TCFL5Q9UL49 500 aa25.15■■□□□ 1.62
STUB1-201ENST00000219548 ZZEF1O43149 2961 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 CROCCQ5TZA2 2017 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 TMEM8BA6NDV4 472 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 FAM227AF5H4B4 570 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 LSM1O15116 133 aaKnown RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 RRP8O43159 456 aaKnown RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 CDC123O75794 336 aaPredicted RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 PRPH2P23942 346 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 MDH1P40925 334 aaKnown RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 HNRNPH2P55795 449 aaKnown RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 RAE1P78406 368 aaKnown RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 GALNTL6Q49A17 601 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 CCNYL2Q5T2Q4 361 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 EFCAB3Q8N7B9 438 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 FAM47BQ8NA70 645 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 PIWIL2Q8TC59 973 aaKnown RBP25.14■■□□□ 1.61
STUB1-201ENST00000219548 TBC1D20Q96BZ9 403 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 EBPLQ9BY08 206 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 C1orf109Q9NX04 203 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 KCMF1Q9P0J7 381 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 ADAM29Q9UKF5 820 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 PADI2Q9Y2J8 665 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 PCDHGA6Q9Y5G7 932 aa25.14■■□□□ 1.61
STUB1-201ENST00000219548 PTPRQQ9UMZ3 2332 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 ARHGAP10A1A4S6 786 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 OR2W5A6NFC9 320 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 PSMD12O00232 456 aaPredicted RBP25.13■■□□□ 1.61
STUB1-201ENST00000219548 SEC22BO75396 215 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 FHP07954 510 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 RAB38P57729 211 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 KLC1Q07866 573 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 WDR75Q8IWA0 830 aaKnown RBP25.13■■□□□ 1.61
STUB1-201ENST00000219548 C11orf24Q96F05 449 aaPredicted RBP25.13■■□□□ 1.61
STUB1-201ENST00000219548 TGIF2Q9GZN2 237 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 LYRM4Q9HD34 91 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 C14orf105Q9NVL8 296 aa25.13■■□□□ 1.61
STUB1-201ENST00000219548 POLR3HQ9Y535 204 aaPredicted RBP25.13■■□□□ 1.61
STUB1-201ENST00000219548 LOC400499M0QZD8 3231 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 NPIPB8E9PQR5 432 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 HDAC3O15379 428 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 PCDH7O60245 1069 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 B4GALT2O60909 372 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 FAM58BPP0C7Q3 252 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 TIA1P31483 386 aaKnown RBP eCLIP25.12■■□□□ 1.61
STUB1-201ENST00000219548 FOLR3P41439 243 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 EFNA3P52797 238 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 GYS2P54840 703 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 RPL38P63173 70 aaKnown RBP25.12■■□□□ 1.61
STUB1-201ENST00000219548 MINDY4Q4G0A6 757 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 MFSD4BQ5TF39 518 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 MRM1Q6IN84 353 aaKnown RBP25.12■■□□□ 1.61
STUB1-201ENST00000219548 RIPOR1Q6ZS17 1223 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 KDF1Q8NAX2 398 aaPredicted RBP25.12■■□□□ 1.61
STUB1-201ENST00000219548 OR2Y1Q8NGV0 311 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 STARD8Q92502 1023 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 TUBGCP3Q96CW5 907 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 CCNL2Q96S94 520 aaPredicted RBP25.12■■□□□ 1.61
STUB1-201ENST00000219548 CCT7Q99832 543 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 LANCL2Q9NS86 450 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 LYARQ9NX58 379 aaKnown RBP25.12■■□□□ 1.61
STUB1-201ENST00000219548 NXT1Q9UKK6 140 aaKnown RBP25.12■■□□□ 1.61
STUB1-201ENST00000219548 ATG4BQ9Y4P1 393 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 ASB4Q9Y574 426 aa25.12■■□□□ 1.61
STUB1-201ENST00000219548 PEX11AO75192 247 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 UMODP07911 640 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 HNRNPFP52597 415 aaKnown RBP25.11■■□□□ 1.61
STUB1-201ENST00000219548 HK2P52789 917 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 MAPK12P53778 367 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 KIAA0040Q15053 153 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 VWA5B1Q5TIE3 1220 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 MAVSQ7Z434 540 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 GPR180Q86V85 440 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 TMEM52Q8NDY8 209 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 OR1F2PQ96R84 312 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 CRB3Q9BUF7 120 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 PFDN4Q9NQP4 134 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 RIC8BQ9NVN3 520 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 TEX10Q9NXF1 929 aaPredicted RBP25.11■■□□□ 1.61
STUB1-201ENST00000219548 MCM8Q9UJA3 840 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 MKL2Q9ULH7 1088 aa25.11■■□□□ 1.61
STUB1-201ENST00000219548 GNG14A0A1W2PPG7 69 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 PRKRAO75569 313 aaKnown RBP25.1■■□□□ 1.61
STUB1-201ENST00000219548 CD63P08962 238 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 CPN2P22792 545 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 ITPKBP27987 946 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 IL10RAQ13651 578 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 ATP6AP1LQ52LC2 224 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 RFTN2Q52LD8 501 aaPredicted RBP25.1■■□□□ 1.61
STUB1-201ENST00000219548 GALNT18Q6P9A2 607 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 EFHD1Q9BUP0 239 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 MEAF6Q9HAF1 191 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 SIRT5Q9NXA8 310 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 VTI1BQ9UEU0 232 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 PHF11Q9UIL8 331 aa25.1■■□□□ 1.61
STUB1-201ENST00000219548 SLCO1B7G3V0H7 640 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms