RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 DDOQ99489 341 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ZNF436Q9C0F3 470 aaPredicted RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 PIP5K1CO60331 668 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 FABP1P07148 127 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 CLDN8P56748 225 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 TEAD4Q15561 434 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 XKR7Q5GH72 579 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 AFTPHQ6ULP2 937 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ZNF704Q6ZNC4 412 aaPredicted RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ARMCX2Q7L311 632 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 C2orf69Q8N8R5 385 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 NELL1Q92832 810 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 LRRC46Q96FV0 321 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 TIMM13Q9Y5L4 95 aaPredicted RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 CCL15-CCL14A0A0B4J2E2 113 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 KRBOX1C9JBD0 128 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 IQCF3P0C7M6 154 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 TRIM23P36406 574 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 PTGES3Q15185 160 aaKnown RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 CCL15Q16663 113 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 LEXMQ3ZCV2 418 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ATG9BQ674R7 924 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ELP2Q6IA86 826 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 CASP12Q6UXS9 341 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 PAWRQ96IZ0 340 aaKnown RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ART5Q96L15 291 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 MARVELD1Q9BSK0 173 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 EBPLQ9BY08 206 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 GOLGA2P5Q9HBQ8 144 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 ZFP64Q9NPA5 681 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 SLC22A11Q9NSA0 550 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 WWOXQ9NZC7 414 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 MRPL15Q9P015 296 aaKnown RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 LIPT1Q9Y234 373 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 MAFBQ9Y5Q3 323 aaPredicted RBP14.06□□□□□ -0.16
PTPRA-201ENST00000216877 GON4LQ3T8J9 2241 aa14.06□□□□□ -0.16
PTPRA-201ENST00000216877 A0A0B4J203 849 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 GNB5O14775 395 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SH3BP5O60239 455 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 CSO75390 466 aaKnown RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 NUDT7P0C024 238 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ATP6V1E1P36543 226 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 MAGEA2P43356 314 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ITGA1P56199 1179 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 NFKB2Q00653 900 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ADAM15Q13444 863 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 MBTPS1Q14703 1052 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ZRANB3Q5FWF4 1079 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 OR2G6Q5TZ20 316 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 HAGHLQ6PII5 290 aaPredicted RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 FIP1L1Q6UN15 594 aaKnown RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ZNF454Q8N9F8 522 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 BTN2A2Q8WVV5 523 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SLC25A46Q96AG3 418 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 PELOQ9BRX2 385 aaKnown RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ACTR6Q9GZN1 396 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 KCNMB2Q9Y691 235 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 C2orf92A0A1B0GVN3 265 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 FAM220BPB1ANY3 271 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 FAM227AF5H4B4 570 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SLC7A4O43246 635 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 HMGN1P05114 100 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 LPLP06858 475 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ADRA2AP08913 450 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 ACPPP15309 386 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 GIFP27352 417 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 GSTM5P46439 218 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 IL2P60568 153 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 C21orf62-AS1Q17RA5 79 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 CIR1Q86X95 450 aaPredicted RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 OR4L1Q8NH43 312 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 APOLD1Q96LR9 279 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 RTP3Q9BQQ7 232 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 LDAHQ9H6V9 325 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SH3BP4Q9P0V3 963 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 NME7Q9Y5B8 376 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 C19orf81C9J6K1 198 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 FPGTO14772 594 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 DOC2BQ14184 412 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 EIF4HQ15056 248 aaKnown RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 VMACQ2NL98 169 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 PKDCCQ504Y2 493 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SFRP5Q5T4F7 317 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 RANBP10Q6VN20 620 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SHFQ7M4L6 423 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 TCEANCQ8N8B7 351 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 AQP11Q8NBQ7 271 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 OR4D10Q8NGI6 311 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 GTF3C2Q8WUA4 911 aaPredicted RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 COPS5Q92905 334 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 C11orf84Q9BUA3 381 aaPredicted RBP14.05□□□□□ -0.16
PTPRA-201ENST00000216877 CRB3Q9BUF7 120 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 SLC39A1Q9NY26 324 aa14.05□□□□□ -0.16
PTPRA-201ENST00000216877 YKT6O15498 198 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 SCG5P05408 212 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 OR56A5P0C7T3 313 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms