RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ABOP16442 354 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 EPORP19235 508 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 SSTR1P30872 391 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 MEOX1P50221 254 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 SLC12A2P55011 1212 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 MTTPP55157 894 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 LIM2P55344 173 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 RCN2Q14257 317 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 EFTUD2Q15029 972 aaKnown RBP eCLIP14.78□□□□□ -0.043e-7■■■■■ 48.8
ERCC1-201ENST00000013807 TRIM40Q6P9F5 258 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 MDGA2Q7Z553 956 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 GPSM1Q86YR5 675 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 CYP4Z2PQ8N1L4 340 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 TMEM132CQ8N3T6 1108 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 TMEM156Q8N614 296 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 OR8K3Q8NH51 312 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 FAM57AQ8TBR7 257 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 PYROXD1Q8WU10 500 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 CDKL2Q92772 493 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 NCLNQ969V3 563 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 RBBP8Q99708 897 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 SPOCK3Q9BQ16 436 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 ERP44Q9BS26 406 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 PHACTR1Q9C0D0 580 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 ENKD1Q9H0I2 346 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 LYRM4Q9HD34 91 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 SNX24Q9Y343 169 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 FREM3P0C091 2139 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 NINQ8N4C6 2090 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 SPG11Q96JI7 2443 aa14.77□□□□□ -0.04
ERCC1-201ENST00000013807 TCRBV9S1A1TA0A576 114 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 FAM187AA6NFU0 413 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 FAM159BA6NKW6 160 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 A8MUA0 341 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 CLGNO14967 610 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 FANCGO15287 622 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 PEX1O43933 1283 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 GSTA2P09210 222 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 STMN1P16949 149 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 CD22P20273 847 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 SLC13A2Q13183 592 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 LAPTM5Q13571 262 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 DOC2AQ14183 400 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 OR4D1Q15615 310 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 CMPK2Q5EBM0 449 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 MORN4Q8NDC4 146 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 SRFBP1Q8NEF9 429 aaKnown RBP14.77□□□□□ -0.05
ERCC1-201ENST00000013807 PTPMT1Q8WUK0 201 aaPredicted RBP14.77□□□□□ -0.05
ERCC1-201ENST00000013807 C14orf79Q96F83 325 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 KRT12Q99456 494 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 CCDC77Q9BR77 488 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 ROGDIQ9GZN7 287 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 CAB39LQ9H9S4 337 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 PNO1Q9NRX1 252 aaKnown RBP14.77□□□□□ -0.05
ERCC1-201ENST00000013807 MYOTQ9UBF9 498 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 FBXW2Q9UKT8 454 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 MED13LQ71F56 2210 aa14.77□□□□□ -0.05
ERCC1-201ENST00000013807 ARHGAP21Q5T5U3 1957 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 A0A0G2JN53 185 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 NCF1BA6NI72 391 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-201ENST00000013807 NCF1CA8MVU1 366 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-201ENST00000013807 C19orf84I3L1E1 186 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PRKNO60260 465 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PIAS1O75925 651 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 SCELO95171 688 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 TUBB4AP04350 444 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 NCF1P14598 390 aaPredicted RBP14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PPP2R1BP30154 601 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PTGER1P34995 402 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PTGS2P35354 604 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 GP5P40197 560 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 KIR3DL1P43629 444 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 KCNC1P48547 511 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 HSPA7P48741 367 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 SSR4P51571 173 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PLA2G16P53816 162 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 HSF1Q00613 529 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 TGM3Q08188 693 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 PDK4Q16654 411 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 C3orf62Q6ZUJ4 267 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 MAATS1Q7Z4T9 603 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 UBE3DQ7Z6J8 389 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 LAS2Q8IYD9 372 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 SPATA6LQ8N4H0 392 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 DAZLQ92904 295 aaKnown RBP14.76□□□□□ -0.05
ERCC1-201ENST00000013807 LURAP1Q96LR2 239 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 KCNC2Q96PR1 638 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 CD244Q9BZW8 370 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 TIMMDC1Q9NPL8 285 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 WWOXQ9NZC7 414 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 HRH3Q9Y5N1 445 aa14.76□□□□□ -0.05
ERCC1-201ENST00000013807 A0A1B0GTH9 108 aa14.75□□□□□ -0.05
ERCC1-201ENST00000013807 TFECO14948 347 aaPredicted RBP14.75□□□□□ -0.05
ERCC1-201ENST00000013807 PHGDHO43175 533 aaKnown RBP14.75□□□□□ -0.05
ERCC1-201ENST00000013807 SSTR2P30874 369 aa14.75□□□□□ -0.05
ERCC1-201ENST00000013807 RAB10P61026 200 aa14.75□□□□□ -0.05
ERCC1-201ENST00000013807 CALCOCO2Q13137 446 aa14.75□□□□□ -0.05
ERCC1-201ENST00000013807 SERTAD2Q14140 314 aa14.75□□□□□ -0.05
ERCC1-201ENST00000013807 TMEM35AQ53FP2 167 aa14.75□□□□□ -0.05
ERCC1-201ENST00000013807 XKR6Q5GH73 641 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms