RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	ZW10	O43264	779 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	UROD	P06132	367 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	FURIN	P09958	794 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	NR4A2	P43354	598 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	2e-8	■■■■■ 38.4
PHGDH-233	ENST00000642021	TST	Q16762	297 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	LEXM	Q3ZCV2	418 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	FBXO43	Q4G163	708 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	HENMT1	Q5T8I9	393 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	AKAP14	Q86UN6	197 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	SLC39A11	Q8N1S5	342 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	DEPDC4	Q8N2C3	294 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	CELF2-AS1	Q8N7Q2	184 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	KBTBD8	Q8NFY9	601 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	RAET1E	Q8TD07	263 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	MGLL	Q99685	303 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	THSD1	Q9NS62	852 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	CCDC59	Q9P031	241 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	RAB23	Q9ULC3	237 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	KCNE2	Q9Y6J6	123 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	LEFTY1	O75610	366 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	AP2A2	O94973	939 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	CAT	P04040	527 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	NPPB	P16860	134 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	CHM	P24386	653 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	ARPC4	P59998	168 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	POLR2L	P62875	67 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	PCDH1	Q08174	1060 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF763	Q0D2J5	394 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	C2orf80	Q0P641	193 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	DMC1	Q14565	340 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	SSX1	Q16384	188 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	TMEM215	Q68D42	235 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	MED27	Q6P2C8	311 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	KLHL17	Q6TDP4	642 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	NLRP8	Q86W28	1048 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	TMC8	Q8IU68	726 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	CACTIN-AS1	Q8N1I8	211 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	AQP11	Q8NBQ7	271 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	PIP5K1A	Q99755	562 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	KCNS3	Q9BQ31	491 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	EHD1	Q9H4M9	534 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	C14orf119	Q9NWQ9	140 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	PCDH10	Q9P2E7	1040 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	HCN4	Q9Y3Q4	1203 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	KLK4	Q9Y5K2	254 aa		13.23	□□□□□ -0.29
PHGDH-233	ENST00000642021	NEDD8-MDP1	E9PL57	170 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	ARHGAP33	O14559	1287 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	FFAR1	O14842	300 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	GRM6	O15303	877 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	IGFBP1	P08833	259 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	CBL	P22681	906 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	POU1F1	P28069	291 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	VIPR1	P32241	457 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	CNR2	P34972	360 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	HMGA2	P52926	109 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TAS2R50	P59544	299 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	EIF4H	Q15056	248 aa	Known RBP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	ARSI	Q5FYB1	569 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TMEM220	Q6QAJ8	160 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	C19orf48	Q6RUI8	117 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	UTS2B	Q765I0	119 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF740	Q8NDX6	193 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	BTN2A2	Q8WVV5	523 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	CTRC	Q99895	268 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	WRAP53	Q9BUR4	548 aa	Known RBP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	EMILIN2	Q9BXX0	1053 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	ZNF556	Q9HAH1	456 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	SLC25A13	Q9UJS0	675 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	AP1M2	Q9Y6Q5	423 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	DOCK6	Q96HP0	2047 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	GPR37L1	O60883	481 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	GPX5	O75715	221 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	GADD45G	O95257	159 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TIMP2	P16035	220 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	PIK3CB	P42338	1070 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TBPL1	P62380	186 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TMEM115	Q12893	351 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	E2F2	Q14209	437 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	SLBP	Q14493	270 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	CRB2	Q5IJ48	1285 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	DEPDC1	Q5TB30	811 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TRAM1L1	Q8N609	369 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	ANKK1	Q8NFD2	765 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	C16orf78	Q8WTQ4	265 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	SORBS1	Q9BX66	1292 aa	Known RBP	13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	CDCA4	Q9BXL8	241 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	HOXD1	Q9GZZ0	328 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TMEM38A	Q9H6F2	299 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	ERVK13-1	Q9NX77	482 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	FBXL12	Q9NXK8	326 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	EHD3	Q9NZN3	535 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	FTSJ1	Q9UET6	329 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	PRELID1	Q9Y255	219 aa		13.22	□□□□□ -0.29
PHGDH-233	ENST00000642021	TRBC2	A0A5B9	178 aa		13.21	□□□□□ -0.29
PHGDH-233	ENST00000642021	PTTG1	O95997	202 aa		13.21	□□□□□ -0.29
PHGDH-233	ENST00000642021	KLK1	P06870	262 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms