RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 AHRP35869 848 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 TSPAN7P41732 249 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 HSD11B2P80365 405 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 HMGCS1Q01581 520 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 RELAQ04206 551 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ZNF33BQ06732 778 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 RGS1Q08116 209 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 KCNAB1Q14722 419 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 NR6A1Q15406 480 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ATP6AP1LQ52LC2 224 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ZC3H12BQ5HYM0 836 aaKnown RBP8.93□□□□□ -0.98
PHGDH-228ENST00000641847 GKAP1Q5VSY0 366 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-228ENST00000641847 FRMPD2BQ6IN97 320 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 FBXO42Q6P3S6 717 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ACAD11Q709F0 780 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 TRIM46Q7Z4K8 759 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 VN1R4Q7Z5H5 301 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 KMT5CQ86Y97 462 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 DNAJC22Q8N4W6 341 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 GBP7Q8N8V2 638 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-228ENST00000641847 PRR7Q8TB68 274 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 BCAS4Q8TDM0 211 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 CREB3L4Q8TEY5 395 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 KLHL6Q8WZ60 621 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 RERGQ96A58 199 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-228ENST00000641847 TUBGCP3Q96CW5 907 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 SEC16BQ96JE7 1060 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 SLC41A2Q96JW4 573 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 MAELQ96JY0 434 aaKnown RBP8.93□□□□□ -0.98
PHGDH-228ENST00000641847 C3orf30Q96M34 536 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 OR2A5Q96R48 311 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 OR52B2Q96RD2 323 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 EBF4Q9BQW3 602 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 CHRNA10Q9GZZ6 450 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 BRF2Q9HAW0 419 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 KCNK13Q9HB14 408 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 RIC8BQ9NVN3 520 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 PDP2Q9P2J9 529 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 GIMAP2Q9UG22 337 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 SLC12A4Q9UP95 1085 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 KCNMB2Q9Y691 235 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 AP1M2Q9Y6Q5 423 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 F8P00451 2351 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 ESPL1Q14674 2120 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 LOC105369274A0A096LPK9 316 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 LOC102723532A0A0G2JNH3 316 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 SERTM1A2A2V5 107 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 H0YGG7 62 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 LSM1O15116 133 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 P2RX6O15547 441 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 HNRNPRO43390 633 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 HCRTR1O43613 425 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 RSL1D1O76021 490 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 TBX6O95947 436 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 TGFB1P01137 390 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 EIF2S1P05198 315 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 NELFEP18615 380 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 GABRA4P48169 554 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 VSX2P58304 361 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 ARF3P61204 181 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 EIF2S3LQ2VIR3 472 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 KRTAP21-3Q3LHN1 58 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 GALNTL6Q49A17 601 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 TOR1AIP1Q5JTV8 583 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 SPDYAQ5MJ70 313 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 TMTC4Q5T4D3 741 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 C1QL3Q5VWW1 255 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 KHDRBS2Q5VWX1 349 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 NXNQ6DKJ4 435 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 CEACAM20Q6UY09 585 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 Q6ZSR9 355 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 ARHGAP22Q7Z5H3 698 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 PIGWQ7Z7B1 504 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 OR4N4Q8N0Y3 316 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 D2HGDHQ8N465 521 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 CSNK1A1LQ8N752 337 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 TRPV3Q8NET8 790 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 NT5CQ8TCD5 201 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 ACTRT2Q8TDY3 377 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 SLC13A3Q8WWT9 602 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 STON2Q8WXE9 905 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-228ENST00000641847 CMTM7Q96FZ5 175 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 PPP3R2Q96LZ3 170 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 SERPINI1Q99574 410 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 CCDC28BQ9BUN5 200 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 MS4A8Q9BY19 250 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 NLNQ9BYT8 704 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 OR51B5Q9H339 312 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 AKTIPQ9H8T0 292 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 FANCEQ9HB96 536 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 TCF7L2Q9NQB0 619 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 IRAK4Q9NWZ3 460 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 MAP10Q9P2G4 905 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 PPT2Q9UMR5 302 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 PLCL2Q9UPR0 1127 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 POLHQ9Y253 713 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 CCL27Q9Y4X3 112 aa8.92□□□□□ -0.98
PHGDH-228ENST00000641847 MED13Q9UHV7 2174 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms