RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 C6orf62Q9GZU0 229 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF282Q9UDV7 671 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 B3GNT3Q9Y2A9 372 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CAB39Q9Y376 341 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 ATG2BQ96BY7 2078 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 SEMA7AO75326 666 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 TBX6O95947 436 aaPredicted RBP16.08■□□□□ 0.17
PHGDH-223ENST00000641597 C1GALT1C1LP0DN25 315 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 NNMTP40261 264 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 OPRD1P41143 372 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 VIPR2P41587 438 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 VEGFBP49765 207 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 SEPHS1P49903 392 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 HNRNPFP52597 415 aaKnown RBP16.08■□□□□ 0.17
PHGDH-223ENST00000641597 IFI44LQ53G44 452 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 PLA2G15Q8NCC3 412 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 RHOXF1Q8NHV9 184 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 MCFD2Q8NI22 146 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 FAM129BQ96TA1 746 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 CENPOQ9BU64 300 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 DSN1Q9H410 356 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 CXorf36Q9H7Y0 433 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 ITM2CQ9NQX7 267 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 ABCB10Q9NRK6 738 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 ACER3Q9NUN7 267 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 QPCTLQ9NXS2 382 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 TAAR2Q9P1P5 351 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 OSGIN1Q9UJX0 560 aa16.08■□□□□ 0.17
PHGDH-223ENST00000641597 SPTBN5Q9NRC6 3674 aaKnown RBP16.08■□□□□ 0.16
PHGDH-223ENST00000641597 PPM1DO15297 605 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 DNAJB5O75953 348 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 GNRH1P01148 92 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 HSD3B1P14060 373 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 CEBPBP17676 345 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 HSD3B2P26439 372 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 ALDH9A1P49189 494 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 RPS3AP61247 264 aaKnown RBP16.08■□□□□ 0.16
PHGDH-223ENST00000641597 EEF1A2Q05639 463 aaKnown RBP16.08■□□□□ 0.16
PHGDH-223ENST00000641597 ST3GAL4Q11206 333 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 RBM45Q8IUH3 476 aaKnown RBP16.08■□□□□ 0.16
PHGDH-223ENST00000641597 LRRC56Q8IYG6 542 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-223ENST00000641597 SVOPQ8N4V2 548 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 ARRDC3Q96B67 414 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 TIFAQ96CG3 184 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 DTD2Q96FN9 168 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 OR5M11Q96RB7 305 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 MS4A12Q9NXJ0 267 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-223ENST00000641597 ATP6V1HQ9UI12 483 aa16.08■□□□□ 0.16
PHGDH-223ENST00000641597 FEZF1A0PJY2 475 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 FFAR1O14842 300 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 POP7O75817 140 aaKnown RBP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 SOX14O95416 240 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 CLTBP09497 229 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 PPM1AP35813 382 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 PUM1Q14671 1186 aaKnown RBP eCLIP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 DHCR24Q15392 516 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 MICAQ29983 383 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 LRRC26Q2I0M4 334 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 UBE2UQ5VVX9 321 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 FAM71E1Q6IPT2 247 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 FAM43BQ6ZT52 329 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 BCDIN3DQ7Z5W3 292 aaKnown RBP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 SLC22A16Q86VW1 577 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 ADGRF3Q8IZF5 1079 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 OR52N2Q8NGI0 321 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 SLC5A11Q8WWX8 675 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 Q96MT0 163 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 VPS35Q96QK1 796 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 CHCHD6Q9BRQ6 235 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 CFHR5Q9BXR6 569 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 BHLHE41Q9C0J9 482 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 DYRK1BQ9Y463 629 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 LTBP2Q14767 1821 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 A0A1W2PRB8 838 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 RFXAPO00287 272 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 GASTP01350 101 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 ADORA3P0DMS8 318 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 GPR1P46091 355 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 LIM2P55344 173 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 NLRP8Q86W28 1048 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 AQP11Q8NBQ7 271 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 SLC38A4Q969I6 547 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 PPP1R14BQ96C90 147 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 IL4I1Q96RQ9 567 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 WDR12Q9GZL7 423 aaKnown RBP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 FBXO8Q9NRD0 319 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 CUEDC1Q9NWM3 386 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-223ENST00000641597 TAS2R9Q9NYW1 312 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 SLC23A2Q9UGH3 650 aa16.07■□□□□ 0.16
PHGDH-223ENST00000641597 TRBC2A0A5B9 178 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 TSPAN11A1L157 253 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 CLCA1A8K7I4 914 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 DSCR3O14972 297 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 ADAMDEC1O15204 470 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 GPR37L1O60883 481 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 B4GALT2O60909 372 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 CYP17A1P05093 508 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 GABRB1P18505 474 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 TGM1P22735 817 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms