RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SEMA3DO95025 777 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 IL3P08700 152 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 HOXB3P14651 431 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 EFNA1P20827 205 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 MAGP20916 626 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 AHRP35869 848 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RPL3P39023 403 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 ALDH9A1P49189 494 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 POLE2P56282 527 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 MTPNP58546 118 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RPS15AP62244 130 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 MC1RQ01726 317 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 LIPEQ05469 1076 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RGS1Q08116 209 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 TGM3Q08188 693 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 EPS8Q12929 822 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 DUOXA1Q1HG43 343 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RABL3Q5HYI8 236 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 C6orf52Q5T4I8 152 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 ZNF425Q6IV72 752 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 NANOGP8Q6NSW7 305 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 SPESP1Q6UW49 350 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 DLEU7Q6UYE1 221 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 CEP68Q76N32 757 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 R3HCC1LQ7Z5L2 792 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 SATL1Q86VE3 508 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 PAQR7Q86WK9 346 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 NUDT13Q86X67 352 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RIMKLAQ8IXN7 391 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RBM12BQ8IXT5 1001 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 KIAA2013Q8IYS2 634 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 ARL14Q8N4G2 192 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 VPS37AQ8NEZ2 397 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 TSPAN14Q8NG11 270 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 GTF2H4Q92759 462 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 PPWD1Q96BP3 646 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 TESCQ96BS2 214 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 PPCDCQ96CD2 204 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 RMND5BQ96G75 393 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 CNBD2Q96M20 576 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 PANX1Q96RD7 426 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 C17orf62Q9BQA9 187 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 INPP5KQ9BT40 448 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 OSBPL10Q9BXB5 764 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 KCNH6Q9H252 994 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 REEP4Q9H6H4 257 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 GORASP2Q9H8Y8 452 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 NANOGQ9H9S0 305 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 CLK4Q9HAZ1 481 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 MYNNQ9NPC7 610 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 MIEF1Q9NQG6 463 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 ATAD3AQ9NVI7 634 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 FAM120CQ9NX05 1096 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 GMPR2Q9P2T1 348 aaKnown RBP8.44□□□□□ -1.06
PHGDH-219ENST00000641513 EGFL7Q9UHF1 273 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 PCDHGA4Q9Y5G9 962 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 PCDHGA2Q9Y5H1 932 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 ENTPD2Q9Y5L3 495 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 AP1M2Q9Y6Q5 423 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 KNL1Q8NG31 2342 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 TECTAO75443 2155 aa8.44□□□□□ -1.06
PHGDH-219ENST00000641513 CCDC163A0A0D9SF12 145 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 A0A0J9YY10 115 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 LRIT2A6NDA9 550 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 OR5K3A6NET4 321 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 GABRR3A8MPY1 467 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 RHPN2P1A8MT19 583 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 LMO7DNF2Z398 122 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 GSTA4O15217 222 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 ERI3O43414 337 aaKnown RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 DEAF1O75398 565 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 ERN1O75460 977 aaKnown RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 GMNNO75496 209 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 PIAS2O75928 621 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 B3GALT4O96024 378 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 LDLRP01130 860 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 EIF2S1P05198 315 aaKnown RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 ABCB1P08183 1280 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 LAMP1P11279 417 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 PVRP15151 417 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 CDH3P22223 829 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 GSTM2P28161 218 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 TPP2P29144 1249 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 BSGP35613 385 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 STXBP1P61764 594 aaKnown RBP8.43□□□□□ -1.06
PHGDH-219ENST00000641513 PHC1P78364 1004 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 SELPLGQ14242 412 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 SLC36A3Q495N2 470 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 NADK2Q4G0N4 442 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 TMEM35AQ53FP2 167 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 ANXA8L1Q5VT79 327 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 PMS2CLQ68D20 193 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 OR4C11Q6IEV9 310 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 KRT80Q6KB66 452 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 GALNT18Q6P9A2 607 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 TRIM40Q6P9F5 258 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 KLHL35Q6PF15 583 aa8.43□□□□□ -1.06
PHGDH-219ENST00000641513 CYP2R1Q6VVX0 501 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms