RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CYC1P08574 325 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 RNH1P13489 461 aaKnown RBP25.12■■□□□ 1.61
VEGFA-231ENST00000640499 CPA3P15088 417 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 HNRNPFP52597 415 aaKnown RBP25.12■■□□□ 1.61
VEGFA-231ENST00000640499 MTTPP55157 894 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 RAPSNQ13702 412 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 BEND6Q5SZJ8 279 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-231ENST00000640499 MFSD4BQ5TF39 518 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 CHSY3Q70JA7 882 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 NDUFAF7Q7L592 441 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 ANKRD37Q7Z713 158 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 GALNT16Q8N428 558 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 IMMP1LQ96LU5 166 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 KCNC2Q96PR1 638 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 TBCDQ9BTW9 1192 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 SLC25A23Q9BV35 468 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 ZNF700Q9H0M5 742 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 ZNF160Q9HCG1 818 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 OXSMQ9NWU1 459 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 SLC17A7Q9P2U7 560 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 CLDN16Q9Y5I7 305 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 CYR61O00622 381 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 PLPP1O14494 284 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 B3GALT2O43825 422 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 HPDP32754 393 aaPredicted RBP25.11■■□□□ 1.61
VEGFA-231ENST00000640499 ARL1P40616 181 aaPredicted RBP25.11■■□□□ 1.61
VEGFA-231ENST00000640499 LIM2P55344 173 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 DNAJB13P59910 316 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 AIMP2Q13155 320 aaKnown RBP25.11■■□□□ 1.61
VEGFA-231ENST00000640499 TNFAIP8L3Q5GJ75 292 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 FRG2Q64ET8 278 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 PARP9Q8IXQ6 854 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 ACOT4Q8N9L9 421 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 RDH11Q8TC12 318 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 PPP4R1Q8TF05 950 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 REPS1Q96D71 796 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 FRG2BQ96QU4 278 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 ZNF382Q96SR6 550 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 CSF3RQ99062 836 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 ZNF552Q9H707 407 aaPredicted RBP25.11■■□□□ 1.61
VEGFA-231ENST00000640499 PPT2Q9UMR5 302 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 DAPP1Q9UN19 280 aa25.11■■□□□ 1.61
VEGFA-231ENST00000640499 CELA2AP08217 269 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 HIST1H1TP22492 207 aaPredicted RBP25.1■■□□□ 1.61
VEGFA-231ENST00000640499 PTX3P26022 381 aaPredicted RBP25.1■■□□□ 1.61
VEGFA-231ENST00000640499 NAGLUP54802 743 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 NFATC3Q12968 1075 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 CUL3Q13618 768 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 PCLAFQ15004 111 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 KRT71Q3SY84 523 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 TCHHL1Q5QJ38 904 aaPredicted RBP25.1■■□□□ 1.61
VEGFA-231ENST00000640499 OR4C11Q6IEV9 310 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 CPEB2Q7Z5Q1 589 aaKnown RBP25.1■■□□□ 1.61
VEGFA-231ENST00000640499 CLEC1AQ8NC01 280 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 SRFBP1Q8NEF9 429 aaKnown RBP25.1■■□□□ 1.61
VEGFA-231ENST00000640499 ARMC2Q8NEN0 867 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 NECTIN3Q9NQS3 549 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 TRPS1Q9UHF7 1281 aa25.1■■□□□ 1.61
VEGFA-231ENST00000640499 IGKV3D-11A0A0A0MRZ8 115 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 TGFBR3LH3BV60 316 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 PCDH17O14917 1159 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 RAB38P57729 211 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 TGM3Q08188 693 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 MYBPC3Q14896 1274 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 ABRAXAS2Q15018 415 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 NSDHLQ15738 373 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 LACTB2Q53H82 288 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-231ENST00000640499 QSOX2Q6ZRP7 698 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 C10orf107Q8IVU9 208 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 MYRIPQ8NFW9 859 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 METTL21AQ8WXB1 218 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 RGMAQ96B86 450 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 CCDC126Q96EE4 140 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 SMAD5Q99717 465 aaKnown RBP25.09■■□□□ 1.61
VEGFA-231ENST00000640499 MAPKAP1Q9BPZ7 522 aa25.09■■□□□ 1.61
VEGFA-231ENST00000640499 NSG1A0A0A6YYJ2 146 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 CCDC151A5D8V7 595 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 TYROBPO43914 113 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 EEDO75530 441 aaKnown RBP25.08■■□□□ 1.61
VEGFA-231ENST00000640499 PDYNP01213 254 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 MAOAP21397 527 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 BSGP35613 385 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 LCP2Q13094 533 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 SGO1Q5FBB7 561 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 GPRIN3Q6ZVF9 776 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 ASB18Q6ZVZ8 466 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 PTRH1Q86Y79 214 aaKnown RBP25.08■■□□□ 1.61
VEGFA-231ENST00000640499 SCUBE1Q8IWY4 988 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 CCNYL1Q8N7R7 359 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 CDYL2Q8N8U2 506 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 TCP10LQ8TDR4 215 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 PTCHD1Q96NR3 888 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 ZBTB20Q9HC78 741 aaPredicted RBP25.08■■□□□ 1.61
VEGFA-231ENST00000640499 LYRM4Q9HD34 91 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 TNFRSF12AQ9NP84 129 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 GPR83Q9NYM4 423 aa25.08■■□□□ 1.61
VEGFA-231ENST00000640499 A0A088AWK7 358 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 PRMT3O60678 531 aa25.07■■□□□ 1.6
VEGFA-231ENST00000640499 SEC24DO94855 1032 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-231ENST00000640499 MLYCDO95822 493 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms