RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PSMB4P28070 264 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 RPL9P32969 192 aaKnown RBP3.51□□□□□ -1.85
CCDC7-216ENST00000640058 CNTN1Q12860 1018 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 ZNF273Q14593 569 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 RFTN1Q14699 578 aaPredicted RBP3.51□□□□□ -1.85
CCDC7-216ENST00000640058 TEX35Q5T0J7 233 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 SLC30A6Q6NXT4 461 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 C17orf107Q6ZR85 190 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 CHST3Q7LGC8 479 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 ADCK2Q7Z695 626 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 OR6T1Q8NGN1 323 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 OR1B1Q8NGR6 318 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 CD99L2Q8TCZ2 262 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 HEXDCQ8WVB3 486 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 SMPDL3AQ92484 453 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 RAD54LQ92698 747 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 CYYR1Q96J86 154 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 RABEP2Q9H5N1 569 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 THYN1Q9P016 225 aa3.51□□□□□ -1.85
CCDC7-216ENST00000640058 FAM168BA1KXE4 195 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 FAM86B1E9PN63 330 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 ZNF253O75346 499 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 PGLSO95336 258 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 HCKP08631 526 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 CCDC175P0C221 793 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 FAM86B2P0C5J1 330 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 SLC1A3P43003 542 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 OR3A3P47888 321 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 BACE1P56817 501 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 RBBP4Q09028 425 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 PPA1Q15181 289 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 TIMM50Q3ZCQ8 353 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 C6orf136Q5SQH8 315 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 RPUSD3Q6P087 351 aaKnown RBP3.5□□□□□ -1.85
CCDC7-216ENST00000640058 Q6ZVH6 145 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 DNAJB7Q7Z6W7 309 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-216ENST00000640058 NCOA7Q8NI08 942 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 LIPHQ8WWY8 451 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 BADQ92934 168 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 ST6GALNAC6Q969X2 333 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 ANKRD27Q96NW4 1050 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 RCHY1Q96PM5 261 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 MGME1Q9BQP7 344 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 PINK1Q9BXM7 581 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 SLC39A8Q9C0K1 460 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 NYAP2Q9P242 653 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 ARMCX1Q9P291 453 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 SPATA2Q9UM82 520 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 NIP7Q9Y221 180 aaKnown RBP eCLIP3.5□□□□□ -1.85
CCDC7-216ENST00000640058 PCDHGA1Q9Y5H4 931 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 CPQQ9Y646 472 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 POGZQ7Z3K3 1410 aa3.5□□□□□ -1.85
CCDC7-216ENST00000640058 FCGR3BO75015 233 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 MOCS2O96007 188 aaPredicted RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 IGHG1P01857 330 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 UMPSP11172 480 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 EEF1DP29692 281 aaKnown RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 SPRP35270 261 aaPredicted RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 DRD3P35462 400 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 KRT20P35900 424 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 IST1P53990 364 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 PPIAP62937 165 aaKnown RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 RPS27AP62979 156 aaKnown RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 TCP11X2Q5H9J9 407 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 NEPROQ6NW34 567 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 SLC27A4Q6P1M0 643 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 SLC43A2Q8N370 569 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 CARNMT1Q8N4J0 409 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 TSSK2Q96PF2 358 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 NFKBIL1Q9UBC1 381 aaPredicted RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 NOCTQ9UK39 431 aaKnown RBP3.49□□□□□ -1.85
CCDC7-216ENST00000640058 GMEB2Q9UKD1 530 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 GTF3C4Q9UKN8 822 aa3.49□□□□□ -1.85
CCDC7-216ENST00000640058 IGKV6D-21A0A0A0MT36 114 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 ANKRD34CP0C6C1 535 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 PDGFRAP16234 1089 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 ZBTB25P24278 435 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 ADARP55265 1226 aaKnown RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 PTENP60484 403 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 RSBN1Q5VWQ0 802 aaPredicted RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 KLHL10Q6JEL2 608 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 TMEM182Q6ZP80 229 aaPredicted RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 ERN2Q76MJ5 926 aaKnown RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 NAXDQ8IW45 347 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 PARP8Q8N3A8 854 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 KIF18AQ8NI77 898 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 B3GALT6Q96L58 329 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 FER1L6-AS2Q96M78 137 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 TEX13BQ9BXU2 312 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 MTIF3Q9H2K0 278 aaKnown RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 UBQLN3Q9H347 655 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 UBE2TQ9NPD8 197 aaPredicted RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 SH3GLB2Q9NR46 395 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 MRPL11Q9Y3B7 192 aaKnown RBP3.48□□□□□ -1.85
CCDC7-216ENST00000640058 CCL27Q9Y4X3 112 aa3.48□□□□□ -1.85
CCDC7-216ENST00000640058 FER1L5A0AVI2 2057 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms