RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 RHBGQ9H310 441 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 PIGMQ9H3S5 423 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 CALHM2Q9HA72 323 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 ZFP64Q9NPA5 681 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 NECTIN3Q9NQS3 549 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 QPCTLQ9NXS2 382 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 PSD3Q9NYI0 1048 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 ZFATQ9P243 1243 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 ZNF223Q9UK11 482 aaPredicted RBP10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
PTP4A1-207ENST00000639568 E7ENX8 843 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PRKNO60260 465 aaPredicted RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 SLC16A8O95907 504 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 SYF2O95926 243 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 GAS8O95995 478 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 CATP04040 527 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 SERPING1P05155 500 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 CRYGSP22914 178 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 GRK3P35626 688 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 TAP2Q03519 686 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 TBL3Q12788 808 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 UBAP2Q5T6F2 1119 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 SLC22A10Q63ZE4 541 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 SYDE1Q6ZW31 735 aaPredicted RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 APTXQ7Z2E3 356 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 LRRC25Q8N386 305 aaPredicted RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PPHLN1Q8NEY8 458 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 ZNF480Q8WV37 535 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PDLIM2Q96JY6 352 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PIGQQ9BRB3 760 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 SGPP1Q9BX95 441 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 NUP62CLQ9H1M0 184 aa10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PIH1D1Q9NWS0 290 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PPIEQ9UNP9 301 aaKnown RBP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.79
PTP4A1-207ENST00000639568 ABCA1O95477 2261 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 NDUFS4O43181 175 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 TRAPPC6AO75865 159 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 RNH1P13489 461 aaKnown RBP10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 ALOX12P18054 663 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 SRD5A1P18405 259 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 CHRM3P20309 590 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 PSMA3P25788 255 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 GDF1P27539 372 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 CFPP27918 469 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 COILP38432 576 aaPredicted RBP10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 TTPAP49638 278 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 GPR143P51810 404 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 PRAMEP78395 509 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 CRYZQ08257 329 aaKnown RBP10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 FOXF2Q12947 444 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 PDLIM3Q53GG5 364 aaPredicted RBP10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 C9orf106Q8NAJ2 232 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 ZNF740Q8NDX6 193 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 SGMS2Q8NHU3 365 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 QRFPRQ96P65 431 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 FAM111AQ96PZ2 611 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 PRDM14Q9GZV8 571 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 ACBD3Q9H3P7 528 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 LRRC40Q9H9A6 602 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 SH2D2AQ9NP31 389 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 TMEM160Q9NX00 188 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.09□□□□□ -0.793e-7■□□□□ 11
PTP4A1-207ENST00000639568 CLCA3PQ9Y6N3 262 aa10.09□□□□□ -0.79
PTP4A1-207ENST00000639568 A0A0G2JK05 382 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 MACROD2A1Z1Q3 448 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 A8MXE2 369 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 CEP104O60308 925 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 SERPIND1P05546 499 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 PGRP06401 933 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 ATP5DP30049 168 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 HK2P52789 917 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 RPS4XP62701 263 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 EEF1A1P68104 462 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 FAM27E3Q08E93 113 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 PRAMEF20Q5VT98 475 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 EEF1A1P5Q5VTE0 462 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 LDB1Q86U70 411 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 LRRC6Q86X45 466 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 CDKL3Q8IVW4 592 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 AFAP1L2Q8N4X5 818 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 OR5L2Q8NGL0 311 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 OR13J1Q8NGT2 312 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 GABPB2Q8TAK5 448 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC22A8Q8TCC7 542 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 IGFBPL1Q8WX77 278 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 UCN3Q969E3 161 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 INTS12Q96CB8 462 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 ZMYND19Q96E35 227 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 ZC3HAV1LQ96H79 300 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 ZFP3Q96NJ6 502 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 TM9SF2Q99805 663 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 ANGPTL4Q9BY76 406 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 CLK4Q9HAZ1 481 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 PACSIN3Q9UKS6 424 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF148Q9UQR1 794 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 MMACHCQ9Y4U1 282 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 PCDHA13Q9Y5I0 950 aa10.08□□□□□ -0.8
PTP4A1-207ENST00000639568 SPOPO43791 374 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms