RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 WDR77Q9BQA1 342 aaPredicted RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 TMEM109Q9BVC6 243 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 GPR83Q9NYM4 423 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 B3GALT2O43825 422 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 SPAG7O75391 227 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 HPP00738 406 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 RNH1P13489 461 aaKnown RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 MAOAP21397 527 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ATP5A1P25705 553 aaKnown RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ITGA3P26006 1051 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 MTTPP55157 894 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 LIM2P55344 173 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 MYBPC3Q14896 1274 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 TCHHL1Q5QJ38 904 aaPredicted RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 CHSY3Q70JA7 882 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 IQCKQ8N0W5 287 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ACOT4Q8N9L9 421 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 FAM47BQ8NA70 645 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 PPP4R1Q8TF05 950 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 KCNC2Q96PR1 638 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 SERINC2Q96SA4 455 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ZNF717Q9BY31 904 aaPredicted RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ZNF700Q9H0M5 742 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 GSTO2Q9H4Y5 243 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 CLK4Q9HAZ1 481 aaKnown RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 NECTIN3Q9NQS3 549 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 KCMF1Q9P0J7 381 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 RELNP78509 3460 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 NSG1A0A0A6YYJ2 146 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 PLPP1O14494 284 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 SEC24DO94855 1032 aaPredicted RBP20.48■□□□□ 0.87
SCN1B-206ENST00000638536 MYL2P10916 166 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 IL10P22301 178 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 SERPINB1P30740 379 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 NSDHLQ15738 373 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 CCDC153Q494R4 210 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 TMEM35AQ53FP2 167 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 CPEB2Q7Z5Q1 589 aaKnown RBP20.48■□□□□ 0.87
SCN1B-206ENST00000638536 SLC22A9Q8IVM8 553 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 METTL21AQ8WXB1 218 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 IMMP1LQ96LU5 166 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 SMAD5Q99717 465 aaKnown RBP20.48■□□□□ 0.87
SCN1B-206ENST00000638536 MAPKAP1Q9BPZ7 522 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 NPLQ9BXD5 320 aaPredicted RBP20.48■□□□□ 0.87
SCN1B-206ENST00000638536 RRAGDQ9NQL2 400 aaPredicted RBP20.48■□□□□ 0.87
SCN1B-206ENST00000638536 ADGRE2Q9UHX3 823 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 DAPP1Q9UN19 280 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 CLDN16Q9Y5I7 305 aa20.48■□□□□ 0.87
SCN1B-206ENST00000638536 HELZ2Q9BYK8 2649 aaKnown RBP20.48■□□□□ 0.87
SCN1B-206ENST00000638536 TGFBR3LH3BV60 316 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 UBFD1O14562 309 aaKnown RBP20.47■□□□□ 0.87
SCN1B-206ENST00000638536 OTCP00480 354 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 CD97P48960 835 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 RAB38P57729 211 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 GGTA1PQ4G0N0 100 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 SGO1Q5FBB7 561 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 FRG2Q64ET8 278 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 REPS1Q96D71 796 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 THOC3Q96J01 351 aaKnown RBP20.47■□□□□ 0.87
SCN1B-206ENST00000638536 PTCHD1Q96NR3 888 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 ZIM3Q96PE6 472 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 FRG2BQ96QU4 278 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 HBEGFQ99075 208 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 TBCDQ9BTW9 1192 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 COPS7BQ9H9Q2 264 aaPredicted RBP20.47■□□□□ 0.87
SCN1B-206ENST00000638536 SLC17A7Q9P2U7 560 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 PLLPQ9Y342 182 aa20.47■□□□□ 0.87
SCN1B-206ENST00000638536 B8ZZF3 427 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 FOXE1O00358 373 aaPredicted RBP20.46■□□□□ 0.87
SCN1B-206ENST00000638536 CYR61O00622 381 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 TUBBP07437 444 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 HIST1H1TP22492 207 aaPredicted RBP20.46■□□□□ 0.87
SCN1B-206ENST00000638536 HPDP32754 393 aaPredicted RBP20.46■□□□□ 0.87
SCN1B-206ENST00000638536 PGDP52209 483 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 KRT71Q3SY84 523 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 SFT2D3Q587I9 215 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 OR4C11Q6IEV9 310 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 CCNYL1Q8N7R7 359 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 ARMC2Q8NEN0 867 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 PSMF1Q92530 271 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 APOPT1Q96IL0 206 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 MKS1Q9NXB0 559 aa20.46■□□□□ 0.87
SCN1B-206ENST00000638536 IGKV3D-11A0A0A0MRZ8 115 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 PSMD12O00232 456 aaPredicted RBP20.45■□□□□ 0.87
SCN1B-206ENST00000638536 PRMT3O60678 531 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 EEDO75530 441 aaKnown RBP20.45■□□□□ 0.87
SCN1B-206ENST00000638536 SCELO95171 688 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 PDYNP01213 254 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 CPA3P15088 417 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 JAK1P23458 1154 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 PTX3P26022 381 aaPredicted RBP20.45■□□□□ 0.87
SCN1B-206ENST00000638536 BSGP35613 385 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 SSR2P43308 183 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 NAGLUP54802 743 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 C19orf57Q0VDD7 668 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 PCLAFQ15004 111 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 AP5B1Q2VPB7 878 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 TTC19Q6DKK2 380 aaPredicted RBP20.45■□□□□ 0.87
SCN1B-206ENST00000638536 QSOX2Q6ZRP7 698 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 C10orf107Q8IVU9 208 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms