RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 CERS2Q96G23 380 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 DEFB127Q9H1M4 99 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 LIN28AQ9H9Z2 209 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 KCNJ16Q9NPI9 418 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 TIMMDC1Q9NPL8 285 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 PNO1Q9NRX1 252 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 CORO1CQ9ULV4 474 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 YARS2Q9Y2Z4 477 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 DYRK1BQ9Y463 629 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 A0A0G2JN53 185 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 LRIT2A6NDA9 550 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 USP27XA6NNY8 438 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 CDC7O00311 574 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 OR2J2O76002 312 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 ZFAND5O76080 213 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 OR6B1O95007 311 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 TBX6O95947 436 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 FNTAP49354 379 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 ART1P52961 327 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 HSD17B7P56937 341 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 PPIAP62937 165 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 GXYLT1Q4G148 440 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 FAM45BPQ6NSW5 357 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 TRMT10BQ6PF06 316 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 GPALPP1Q8IXQ4 340 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 KLHDC8AQ8IYD2 350 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 OR2M7Q8NG81 312 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 GABPB2Q8TAK5 448 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 FAM45AQ8TCE6 357 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 NRGNQ92686 78 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 GAL3ST3Q96A11 431 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 POM121Q96HA1 1249 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 PBKQ96KB5 322 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 NAT9Q9BTE0 207 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 NPLQ9BXD5 320 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 PNPLA3Q9NST1 481 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 MYOTQ9UBF9 498 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 KCNN3Q9UGI6 736 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.61
CACNA1A-250ENST00000637809 GTF3C1Q12789 2109 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 NPEPPSL1A6NEC2 478 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 FAM166BA8MTA8 275 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 A8MVJ9 347 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 GOLGA6L6A8MZA4 724 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 NPIPA2E9PIF3 369 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 NPIPA3F8WFD2 350 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 PGRMC1O00264 195 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 CYR61O00622 381 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 DNALI1O14645 258 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ERI3O43414 337 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 KLK8O60259 260 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 IGHG3P01860 377 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 C1GALT1C1LP0DN25 315 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ZNF37AP17032 561 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 DNAJA1P31689 397 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 SOX3P41225 446 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 SLC6A12P48065 614 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 RAB38P57729 211 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 STXBP1P61764 594 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 CDKL1Q00532 357 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 C18orf21Q32NC0 220 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 BBS9Q3SYG4 887 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 IL20RBQ6UXL0 311 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 RGS9BPQ6ZS82 235 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ACAD11Q709F0 780 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 VN1R5Q7Z5H4 357 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 FAM47BQ8NA70 645 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ANKRD7Q92527 254 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 RASL10BQ96S79 203 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 CSF3RQ99062 836 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 CCDC77Q9BR77 488 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ZNF559Q9BR84 538 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 TTTY12Q9BZ98 90 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ADAP2Q9NPF8 381 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 HPF1Q9NWY4 346 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 ERVK-11Q9UQG0 969 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 JRKLQ9Y4A0 524 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 FAM215AQ9Y5M1 114 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 LIPGQ9Y5X9 500 aa11.26□□□□□ -0.61
CACNA1A-250ENST00000637809 A0A1B0GVC2 190 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 OR14I1A6ND48 311 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 G3V3Y1 287 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 WWP2O00308 870 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 CLDN4O14493 209 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 ZNF354AO60765 605 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 PRAMEF4O60810 478 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 GLI4P10075 376 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 SAT1P21673 171 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 IVDP26440 423 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 ACVR2AP27037 513 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 GDF5P43026 501 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 HNMTP50135 292 aa11.25□□□□□ -0.61
CACNA1A-250ENST00000637809 HK2P52789 917 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms