RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 IGKV3D-11A0A0A0MRZ8 115 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 C4orf51C9J302 202 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 K7EPI3 171 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 UNC5CO95185 931 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 STSP08842 583 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 EPB42P16452 691 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 SERPINB1P30740 379 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 MSH2P43246 934 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 KCNC1P48547 511 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 CLCN2P51788 898 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 CASP6P55212 293 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 KCNK10P57789 538 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 RUNX2Q13950 521 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 EFTUD2Q15029 972 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLN6-221ENST00000637494 TERF2Q15554 542 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 ADPRMQ3LIE5 342 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 MROH9Q5TGP6 573 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 MED27Q6P2C8 311 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 KLC3Q6P597 504 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 CHSY3Q70JA7 882 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 ISCA2Q86U28 154 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 MDS2Q8NDY4 140 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 MNS1Q8NEH6 495 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 ZNF592Q92610 1267 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 TMEM125Q96AQ2 219 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 SIGLEC12Q96PQ1 595 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 KCNC2Q96PR1 638 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 AICDAQ9GZX7 198 aa17.75■□□□□ 0.43
CLN6-221ENST00000637494 SUCOQ9UBS9 1254 aaKnown RBP17.75■□□□□ 0.43
CLN6-221ENST00000637494 ZNF490Q9ULM2 529 aaPredicted RBP17.75■□□□□ 0.43
CLN6-221ENST00000637494 UBXN8O00124 270 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 MYO1DO94832 1006 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 SP1P08047 785 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 PCNAP12004 261 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 CASP2P42575 452 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 CYB561P49447 251 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 ALDH6A1Q02252 535 aaKnown RBP17.74■□□□□ 0.43
CLN6-221ENST00000637494 SPINK14Q6IE38 97 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 SLC25A25Q6KCM7 469 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 ABHD17CQ6PCB6 329 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 FJX1Q86VR8 437 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 KIF2BQ8N4N8 673 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 FAM47BQ8NA70 645 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 C7orf57Q8NEG2 295 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 B3GNT7Q8NFL0 401 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 RHEBL1Q8TAI7 183 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 UBTD2Q8WUN7 234 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 NXNL1Q96CM4 212 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 QRFPRQ96P65 431 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 ATOH8Q96SQ7 321 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 NPAS2Q99743 824 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 CENPKQ9BS16 269 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 TBCDQ9BTW9 1192 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 ADGRE2Q9UHX3 823 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 IKBKGQ9Y6K9 419 aa17.74■□□□□ 0.43
CLN6-221ENST00000637494 USP9XQ93008 2570 aaPredicted RBP17.73■□□□□ 0.43
CLN6-221ENST00000637494 TRGV8A0A0C4DH27 118 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 TRBV11-1A0A0K0K1C0 115 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 IFNA16P05015 189 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 GFAPP14136 432 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 CERS1P27544 350 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 TPP2P29144 1249 aaPredicted RBP17.73■□□□□ 0.43
CLN6-221ENST00000637494 TYK2P29597 1187 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 SERPINB8P50452 374 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 PHEXP78562 749 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 PMP22Q01453 160 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 DLG1Q12959 904 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 BMPR2Q13873 1038 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 ACAP2Q15057 778 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 AP5B1Q2VPB7 878 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 TMEM35AQ53FP2 167 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 C1QL3Q5VWW1 255 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 TAOK1Q7L7X3 1001 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 SCUBE1Q8IWY4 988 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 TMEM132CQ8N3T6 1108 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 KCTD4Q8WVF5 259 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 VMP1Q96GC9 406 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 SCMH1Q96GD3 660 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 F2RL3Q96RI0 385 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 ADAP2Q9NPF8 381 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 SNX15Q9NRS6 342 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 IGSF5Q9NSI5 407 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 ZDHHC18Q9NUE0 388 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 FBXW2Q9UKT8 454 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 DAPP1Q9UN19 280 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 CNTRLQ7Z7A1 2325 aa17.73■□□□□ 0.43
CLN6-221ENST00000637494 USP9YO00507 2555 aaPredicted RBP17.72■□□□□ 0.43
CLN6-221ENST00000637494 MAN1A2O60476 641 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 SLC25A12O75746 678 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 C2P06681 752 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 MST1P26927 711 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 LIM2P55344 173 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 MLF1P58340 268 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 STX4Q12846 297 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 MAPKAPK3Q16644 382 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 KRTCAP3Q53RY4 240 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 HIST2H2BCQ6DN03 193 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 MTFR2Q6P444 385 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 GALNTL5Q7Z4T8 443 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 VN1R5Q7Z5H4 357 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms