RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TOX3O15405 576 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 NDUFS4O43181 175 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ADAM12O43184 909 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 LCMT2O60294 686 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 RAMP2O60895 175 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MOSPD3O75425 235 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SUPT3HO75486 399 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RAD17O75943 681 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CRYABP02511 175 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 GPIP06744 558 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MMP3P08254 477 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TFPTP0C1Z6 253 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TRIM49P0CI25 452 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TRIM49CP0CI26 452 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PSKH1P11801 424 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 FCGR2AP12318 317 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZNF44P15621 663 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZNF26P17031 533 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 LBPP18428 481 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PCMT1P22061 227 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 DNASE1P24855 282 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 DDX6P26196 483 aaKnown RBP eCLIP2.86□□□□□ -1.95
VIM-210ENST00000637053 HTR2AP28223 471 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 EPHB2P29323 1055 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PPP2R1AP30153 589 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SERPINB1P30740 379 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 HOXA7P31268 230 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 FCGR2BP31994 310 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 CXCR5P32302 372 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 P2RY2P41231 377 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PRCPP42785 496 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SLC1A2P43004 574 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MAGEB1P43366 347 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CAPZBP47756 277 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TGM4P49221 684 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 EFNA5P52803 228 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RGS8P57771 180 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 FAM3BP58499 235 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 SEC61GP60059 68 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RPL11P62913 178 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 PPP2R2BQ00005 443 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ECT2LQ008S8 904 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RHAGQ02094 409 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 NHLH1Q02575 133 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SULT2A1Q06520 285 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CDH17Q12864 832 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MTAPQ13126 283 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 STX3Q13277 289 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SLAMF1Q13291 335 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ILKQ13418 452 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RIN1Q13671 783 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PTPRCAPQ14761 206 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ETFDHQ16134 617 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PSG3Q16557 428 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 C18orf21Q32NC0 220 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 ADPRMQ3LIE5 342 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZC2HC1CQ53FD0 456 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 LBHQ53QV2 105 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 DCAF6Q58WW2 860 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZNF569Q5MCW4 686 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 BRMS1LQ5PSV4 323 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PMS2CLQ68D20 193 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 GRAMD4Q6IC98 578 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SLFN12LQ6IEE8 588 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZSCAN25Q6NSZ9 544 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MSANTD2Q6P1R3 559 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 FAM180AQ6UWF9 173 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 B3GLCTQ6Y288 498 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 Q6ZVL8 140 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 BMP8AQ7Z5Y6 402 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 KCTD20Q7Z5Y7 419 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SNX20Q7Z614 316 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 LHFPL4Q7Z7J7 247 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZNF554Q86TJ5 538 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ADIPOR2Q86V24 386 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 KMT5CQ86Y97 462 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TMC8Q8IU68 726 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ENTHD1Q8IYW4 607 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 NAGSQ8N159 534 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 GTPBP8Q8N3Z3 284 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 FAM89BQ8N5H3 189 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PQLC3Q8N755 202 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CDYL2Q8N8U2 506 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 HJURPQ8NCD3 748 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 PDPRQ8NCN5 879 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 FBXL13Q8NEE6 735 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 OR5D13Q8NGL4 314 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 OR52N1Q8NH53 320 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RHEBL1Q8TAI7 183 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TBC1D16Q8TBP0 767 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MCOLN3Q8TDD5 553 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 HCAR2Q8TDS4 363 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SNX33Q8WV41 574 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 HSD17B8Q92506 261 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CNOT9Q92600 299 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 NSMAFQ92636 917 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RIT1Q92963 219 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SLC25A28Q96A46 364 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ARRDC3Q96B67 414 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CCDC124Q96CT7 223 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms