RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 NMRAL1Q9HBL8 299 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 NECTIN3Q9NQS3 549 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 NUDT4Q9NZJ9 180 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 FBXW2Q9UKT8 454 aa16.78■□□□□ 0.28
PNKP-225ENST00000636214 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 TRBV11-1A0A0K0K1C0 115 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 LRIT2A6NDA9 550 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 SUPT3HB4E1H0 165 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 C4orf51C9J302 202 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 PRSS44E7EML9 344 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 FANCGO15287 622 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 MAN1A2O60476 641 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 SUPT3HO75486 399 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 TPP2P29144 1249 aaPredicted RBP16.77■□□□□ 0.28
PNKP-225ENST00000636214 CRABP2P29373 138 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 HNRNPH1P31943 449 aaKnown RBP16.77■□□□□ 0.28
PNKP-225ENST00000636214 GGT5P36269 586 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 MAGEA4P43358 317 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 MTTPP55157 894 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.28
PNKP-225ENST00000636214 SRSF11Q05519 484 aaKnown RBP16.77■□□□□ 0.28
PNKP-225ENST00000636214 CKAP4Q07065 602 aaKnown RBP16.77■□□□□ 0.28
PNKP-225ENST00000636214 TERF2Q15554 542 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 OR4D1Q15615 310 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 ZKSCAN8Q15776 578 aaPredicted RBP16.77■□□□□ 0.28
PNKP-225ENST00000636214 SYT10Q6XYQ8 523 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 ZNF595Q8IYB9 648 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 TMEM156Q8N614 296 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 FAM47BQ8NA70 645 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 PDPRQ8NCN5 879 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 FBXO25Q8TCJ0 367 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 UBE2E3Q969T4 207 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 ESAMQ96AP7 390 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 SERINC2Q96SA4 455 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 HES7Q9BYE0 225 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 ALG9Q9H6U8 611 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 RUBCNLQ9H714 662 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 SPACA6W5XKT8 324 aa16.77■□□□□ 0.28
PNKP-225ENST00000636214 NPIPA5E9PKD4 350 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 TAPBPO15533 448 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 SLC19A2O60779 497 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 WISP3O95389 354 aaPredicted RBP16.76■□□□□ 0.27
PNKP-225ENST00000636214 IFNA16P05015 189 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 LTA4HP09960 611 aaKnown RBP16.76■□□□□ 0.27
PNKP-225ENST00000636214 ZNF24P17028 368 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 TFEBP19484 476 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 CA7P43166 264 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 KCNC1P48547 511 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 MLF1P58340 268 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 GPX6P59796 221 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 CHIT1Q13231 466 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 DOC2AQ14183 400 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 NAA30Q147X3 362 aaPredicted RBP16.76■□□□□ 0.27
PNKP-225ENST00000636214 RPTNQ6XPR3 784 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 SCUBE1Q8IWY4 988 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 FBF1Q8TES7 1133 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 VMP1Q96GC9 406 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 GPR137Q96N19 417 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 KCNC2Q96PR1 638 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 AICDAQ9GZX7 198 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 TSPAN10Q9H1Z9 355 aaPredicted RBP16.76■□□□□ 0.27
PNKP-225ENST00000636214 OPTCQ9UBM4 332 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 PTBP2Q9UKA9 531 aaKnown RBP16.76■□□□□ 0.27
PNKP-225ENST00000636214 NPIPA1Q9UND3 350 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
PNKP-225ENST00000636214 MYO9AB2RTY4 2548 aa16.76■□□□□ 0.27
PNKP-225ENST00000636214 GTF3C1Q12789 2109 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 ASPDHA6ND91 283 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 SYCE1LA8MT33 242 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 NME2P1O60361 137 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 NEURL1O76050 574 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 PCNAP12004 261 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 NME2P22392 152 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 CERS1P27544 350 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 MSH2P43246 934 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 HLCSP50747 726 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 RUNX2Q13950 521 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 EFTUD2Q15029 972 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■■■■ 30.5
PNKP-225ENST00000636214 C8orf74Q6P047 294 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 ABHD17CQ6PCB6 329 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.75■□□□□ 0.27
PNKP-225ENST00000636214 CLNKQ7Z7G1 428 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 CMC1Q7Z7K0 106 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 GHDCQ8N2G8 530 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 TMEM132CQ8N3T6 1108 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 THAP3Q8WTV1 239 aaPredicted RBP16.75■□□□□ 0.27
PNKP-225ENST00000636214 UBXN10Q96LJ8 280 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 CENPKQ9BS16 269 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 CD244Q9BZW8 370 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 ADAP2Q9NPF8 381 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 KLF13Q9Y2Y9 288 aaPredicted RBP16.75■□□□□ 0.27
PNKP-225ENST00000636214 ANGPTL3Q9Y5C1 460 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 CELSR2Q9HCU4 2923 aa16.75■□□□□ 0.27
PNKP-225ENST00000636214 KLRC4-KLRK1H3BQV0 150 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 HNRNPRO43390 633 aaKnown RBP16.74■□□□□ 0.27
PNKP-225ENST00000636214 KERAO60938 352 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 FAM155BO75949 473 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 ABOP16442 354 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 SERPINB1P30740 379 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms