RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 SYNDIG1LA6NDD5 238 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 FOXO6A8MYZ6 492 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 CDC7O00311 574 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 B3GALT2O43825 422 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 ZFAND5O76080 213 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 WDR47O94967 919 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 IGFBP2P18065 325 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 GNAZP19086 355 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 GSTM2P28161 218 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 HNRNPH1P31943 449 aaKnown RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 ELK3P41970 407 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 HNMTP50135 292 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 HSD17B7P56937 341 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 RAB38P57729 211 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 PLGLB1Q02325 96 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 HP1BP3Q5SSJ5 553 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 TMIGD1Q6UXZ0 262 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 KLHDC8AQ8IYD2 350 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 NKAPQ8N5F7 415 aaKnown RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 ANKRD7Q92527 254 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 RND1Q92730 232 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 MS4A6EQ96DS6 147 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 NPLQ9BXD5 320 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 DDX47Q9H0S4 455 aaKnown RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 NPDC1Q9NQX5 325 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 RNF6Q9Y252 685 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 YARS2Q9Y2Z4 477 aaKnown RBP13.47□□□□□ -0.25
TUBB3-215ENST00000625617 OARD1Q9Y530 152 aa13.47□□□□□ -0.25
TUBB3-215ENST00000625617 FAM95CA0A1B0GW59 222 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 NKX2-6A6NCS4 301 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 TGFBR3LH3BV60 316 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 PRKNO60260 465 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-215ENST00000625617 H2AFYO75367 372 aaKnown RBP13.46□□□□□ -0.25
TUBB3-215ENST00000625617 OR2J2O76002 312 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 PDE9AO76083 593 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 C1GALT1C1LP0DN25 315 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-215ENST00000625617 HNRNPFP52597 415 aaKnown RBP13.46□□□□□ -0.25
TUBB3-215ENST00000625617 RUNX2Q13950 521 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 ZNF460Q14592 562 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 MORF4L2Q15014 288 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 ELAVL1Q15717 326 aaKnown RBP13.46□□□□□ -0.25
TUBB3-215ENST00000625617 STEAP4Q687X5 459 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 TRIM40Q6P9F5 258 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 PAOXQ6QHF9 649 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 SLCO4C1Q6ZQN7 724 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 CLNKQ7Z7G1 428 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 ZNF595Q8IYB9 648 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 KRT78Q8N1N4 520 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 RPRMLQ8N4K4 120 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 TMEM52Q8NDY8 209 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 OR52N2Q8NGI0 321 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 LILRB4Q8NHJ6 448 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 SLCO2A1Q92959 643 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 LRRC39Q96DD0 335 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 WDR83Q9BRX9 315 aaKnown RBP13.46□□□□□ -0.25
TUBB3-215ENST00000625617 KCNJ16Q9NPI9 418 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 DEPPQ9NTK1 212 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 CLDN16Q9Y5I7 305 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 HRH3Q9Y5N1 445 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 PSAT1Q9Y617 370 aa13.46□□□□□ -0.25
TUBB3-215ENST00000625617 DCHS2Q6V1P9 2916 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 LRIT2A6NDA9 550 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 FAM166BA8MTA8 275 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 OR6B1O95007 311 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 IFNA16P05015 189 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 CERS1P27544 350 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 MSX1P28360 303 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 GDF5P43026 501 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 SLC6A12P48065 614 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 GPR143P51810 404 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 PLA2G16P53816 162 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
TUBB3-215ENST00000625617 TFF3Q07654 80 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 RCN2Q14257 317 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 TSNQ15631 228 aaKnown RBP13.45□□□□□ -0.26
TUBB3-215ENST00000625617 C16orf47Q6ZP98 133 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-215ENST00000625617 RGS9BPQ6ZS82 235 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 GK5Q6ZS86 529 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 ACAD11Q709F0 780 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 SLC22A16Q86VW1 577 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 ZC3HC1Q86WB0 502 aaKnown RBP13.45□□□□□ -0.26
TUBB3-215ENST00000625617 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 TMEM132CQ8N3T6 1108 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 OR2M7Q8NG81 312 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 OR5M3Q8NGP4 307 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 SEC16BQ96JE7 1060 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 PWWP2AQ96N64 755 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 CSF3RQ99062 836 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 UCK2Q9BZX2 261 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 REXO4Q9GZR2 422 aaKnown RBP13.45□□□□□ -0.26
TUBB3-215ENST00000625617 DEFB127Q9H1M4 99 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 COPS7BQ9H9Q2 264 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-215ENST00000625617 MYOTQ9UBF9 498 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 CTNNAL1Q9UBT7 734 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 SNX12Q9UMY4 172 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 TEX264Q9Y6I9 313 aa13.45□□□□□ -0.26
TUBB3-215ENST00000625617 CLCA3PQ9Y6N3 262 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms