RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PRAMEF13Q5VWM6 474 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
PNKP-217ENST00000625216 EPGNQ6UW88 154 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 IGFL3Q6UXB1 125 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 ADCK2Q7Z695 626 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 CLYBLQ8N0X4 340 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 CDYL2Q8N8U2 506 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 ANKS4BQ8N8V4 417 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 STT3BQ8TCJ2 826 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 PNPLA2Q96AD5 504 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 MIEF2Q96C03 454 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 FAR2Q96K12 515 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 PPP1R36Q96LQ0 422 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 C10orf90Q96M02 699 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 PRAP1Q96NZ9 151 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 NTMT1Q9BV86 223 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 TUBB1Q9H4B7 451 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 ZNF552Q9H707 407 aaPredicted RBP11.98□□□□□ -0.49
PNKP-217ENST00000625216 ABCF3Q9NUQ8 709 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 CTSFQ9UBX1 484 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 VTI1BQ9UEU0 232 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 TRPS1Q9UHF7 1281 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 RUVBL1Q9Y265 456 aaKnown RBP11.98□□□□□ -0.49
PNKP-217ENST00000625216 TIMM22Q9Y584 194 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 PTGDR2Q9Y5Y4 395 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 HS3ST3B1Q9Y662 390 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 MAU2Q9Y6X3 613 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 HEATR5BQ9P2D3 2071 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 SOCS6O14544 535 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 PIP5K1BO14986 540 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 DIAPH2O60879 1101 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 SORBS2O94875 1100 aaKnown RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 MED26O95402 600 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 ENO1P06733 434 aaKnown RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 CD22P20273 847 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 ARL1P40616 181 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 IRAK1BP1Q5VVH5 260 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 CAPN13Q6MZZ7 669 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 KIRREL2Q6UWL6 708 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 LCTLQ6UWM7 567 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 MILR1Q7Z6M3 343 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 C17orf64Q86WR6 236 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 KIRREL3Q8IZU9 778 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 ARHGEF39Q8N4T4 335 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 AFAP1L2Q8N4X5 818 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 RBMXL3Q8N7X1 1067 aaKnown RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 CPT1CQ8TCG5 803 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 STON2Q8WXE9 905 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 ATP6V1E2Q96A05 226 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 MAELQ96JY0 434 aaKnown RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 OR52B2Q96RD2 323 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 TGIF2Q9GZN2 237 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 SOX17Q9H6I2 414 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 MEAF6Q9HAF1 191 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 MKKSQ9NPJ1 570 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 SLAMF7Q9NQ25 335 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 C14orf105Q9NVL8 296 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 CUEDC1Q9NWM3 386 aaPredicted RBP11.97□□□□□ -0.49
PNKP-217ENST00000625216 FBXL4Q9UKA2 621 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 RNF11Q9Y3C5 154 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 MAP4K5Q9Y4K4 846 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 DNAJC15Q9Y5T4 150 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 NBASA2RRP1 2371 aa11.97□□□□□ -0.49
PNKP-217ENST00000625216 GOLGA8QA0A0J9YX86 632 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 GOLGA8OA6NCC3 632 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 GOLGA8NF8WBI6 632 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 H0YIG0 161 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 HAT1O14929 419 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 VPS4BO75351 444 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 UROSP10746 265 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 NPPBP16860 134 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 EPHA3P29320 983 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 GRK3P35626 688 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 AVPR1BP47901 424 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 FOXL2P58012 376 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 CSNK1G2P78368 415 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 KLC1Q07866 573 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 E2F2Q14209 437 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 GGTA1PQ4G0N0 100 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 XKR7Q5GH72 579 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 COLEC12Q5KU26 742 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 ATG9BQ674R7 924 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 SLC6A19Q695T7 634 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 C6orf89Q6UWU4 347 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 SHISA6Q6ZSJ9 500 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 ZADH2Q8N4Q0 377 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 CAMKVQ8NCB2 501 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 GALNT11Q8NCW6 608 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 OR11G2Q8NGC1 345 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 C19orf60Q96EN9 201 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 MMABQ96EY8 250 aaPredicted RBP11.96□□□□□ -0.49
PNKP-217ENST00000625216 C3orf30Q96M34 536 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms