RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ZDHHC3Q9NYG2 299 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 HECAQ9UBI9 543 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 GIMAP2Q9UG22 337 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 EIF1AYO14602 144 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 EIF1AXP47813 144 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 OR12D2P58182 307 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ZNF155Q12901 538 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 APOFQ13790 326 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 KCNC3Q14003 757 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 LRP8Q14114 963 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 FAM69AQ5T7M9 428 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 RPS27LQ71UM5 84 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 C1orf52Q8N6N3 182 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 OR14K1Q8NGZ2 314 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 TMEM125Q96AQ2 219 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CXorf40BQ96DE9 158 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ZNF700Q9H0M5 742 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 OR51J1Q9H342 316 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 GPR83Q9NYM4 423 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 C2orf92A0A1B0GVN3 265 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 TMEM221A6NGB7 291 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 J3KR12 359 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 IRAK2O43187 625 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 SCN2BO60939 215 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ZNF823P16415 610 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 S100PP25815 95 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 SP140Q13342 867 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 TMEM69Q5SWH9 247 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 GTF2IRD2BQ6EKJ0 949 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 GTF2IRD2Q86UP8 949 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 OR6K6Q8NGW6 343 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 OR2T35Q8NGX2 323 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ADAD1Q96M93 576 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 PLEKHA1Q9HB21 404 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 EVLQ9UI08 416 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 CACNG2Q9Y698 323 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 YJEFN3A6XGL0 299 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 FUCA1P04066 466 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 LCKP06239 509 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 BMP1P13497 986 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 DCTP40126 519 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 AVPR1BP47901 424 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 COPS5Q92905 334 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ACTR10Q9NZ32 417 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 IQCF5A8MTL0 148 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ENPP3O14638 875 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 SC5DO75845 299 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 FOSL1P15407 271 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 PITPNBP48739 271 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 NOMO2Q5JPE7 1267 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 TMCO2Q7Z6W1 182 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 GTPBP8Q8N3Z3 284 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 SUSD6Q92537 303 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 EPYCQ99645 322 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 RBCK1Q9BYM8 510 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 RSPH9Q9H1X1 276 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 LOC100509620A0A075B734 347 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 LOC285095A0A1B0GVY8 99 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 WTIPA6NIX2 430 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 INPPL1O15357 1258 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 JRKO75564 520 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 TFP02787 698 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CSN2P05814 226 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 SMIM18P0DKX4 95 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ENDOUP21128 410 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 NT5EP21589 574 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 NCBP2P52298 156 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■□□□□ 9.8
VCL-206ENST00000623461 BCL7AQ4VC05 210 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GRHL2Q6ISB3 625 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 RPL13AP3Q6NVV1 102 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 SPRED1Q7Z699 444 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 SECISBP2Q96T21 854 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 NLE1Q9NVX2 485 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 STYXL1Q9Y6J8 313 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 AP1M2Q9Y6Q5 423 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 AOC2O75106 756 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 OAZ2O95190 189 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ZBTB7AO95365 584 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CDK1P06493 297 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 FGF4P08620 206 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GTF2F2P13984 249 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 UQCRC2P22695 453 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 DDOSTP39656 456 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 INHBCP55103 352 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ERVK-25P63136 954 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 DUSP4Q13115 394 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 IQCHQ86VS3 1027 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 NUDT13Q86X67 352 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 KDM1BQ8NB78 822 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 OR7G2Q8NG99 324 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 PYCR2Q96C36 320 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 OR2M2Q96R28 347 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CCDC86Q9H6F5 360 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 ZCCHC3Q9NUD5 404 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 ZFP37Q9Y6Q3 630 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 WNT10BO00744 389 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 SULT1B1O43704 296 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms