RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MTTPP55157 894 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 BTN3A2P78410 334 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 GALNTL6Q49A17 601 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 RFTN2Q52LD8 501 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 PRSS41Q7RTY9 318 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 CPLX4Q7Z7G2 160 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 ACOT4Q8N9L9 421 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 SLC38A9Q8NBW4 561 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 CEP70Q8NHQ1 597 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 OR52B2Q96RD2 323 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 SERINC2Q96SA4 455 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 EBF4Q9BQW3 602 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 CCDC28BQ9BUN5 200 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 SORBS1Q9BX66 1292 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 SLC7A5P2Q9GIP4 190 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 COPS7BQ9H9Q2 264 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 CLK4Q9HAZ1 481 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 GIMAP2Q9UG22 337 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 NAALAD2Q9Y3Q0 740 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 SDK2Q58EX2 2172 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A0A6YYC8 382 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A0A6YYD5 115 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A0G2JND7 137 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 GOLGA8QA0A0J9YX86 632 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 GOLGA8OA6NCC3 632 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 GOLGA8NF8WBI6 632 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 I3L1I5 382 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 B3GALT4O96024 378 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 NTRK1P04629 796 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF28P17035 718 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 LBPP18428 481 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 ALAS2P22557 587 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 RORAP35398 523 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 AVPR1BP47901 424 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 RPL38P63173 70 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 RAE1P78406 368 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 EMX2Q04743 252 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 LRRC69Q6ZNQ3 347 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 ACAD11Q709F0 780 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 OR9A4Q8NGU2 314 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 CLIP3Q96DZ5 547 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 RNF31Q96EP0 1072 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 GBP5Q96PP8 586 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 ULBP3Q9BZM4 244 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 SPRY4Q9C004 299 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 FAM107BQ9H098 131 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 TCF7L2Q9NQB0 619 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 WDR70Q9NW82 654 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 MCM8Q9UJA3 840 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 AHCTF1Q8WYP5 2266 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 SCN3AQ9NY46 2000 aa18.78■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A087WV48 116 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 STMND1H3BQB6 276 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 KLK10O43240 276 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 B3GALT2O43825 422 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 EEDO75530 441 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 MYO1DO94832 1006 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 KIAA0754O94854 1291 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 ONECUT2O95948 504 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 KLK1P06870 262 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 LIPCP11150 499 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 CERS1P27544 350 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 TPP2P29144 1249 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 TIA1P31483 386 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 ERVK-8P63133 956 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 MAD2L1Q13257 205 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 TGIF1Q15583 401 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 LSM12Q3MHD2 195 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF385CQ66K41 422 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 NOXRED1Q6NXP6 359 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 SPATA21Q7Z572 469 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 PARP9Q8IXQ6 854 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 DTWD1Q8N5C7 304 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 AMER3Q8N944 861 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 FNDC5Q8NAU1 212 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 ELAC2Q9BQ52 826 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 NPLQ9BXD5 320 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 TMEM120AQ9BXJ8 343 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 DPH1Q9BZG8 443 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 ASIC5Q9NY37 505 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 NDOR1Q9UHB4 597 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 TMEM184BQ9Y519 407 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 FER1L5A0AVI2 2057 aa18.77■□□□□ 0.6
PDLIM2-221ENST00000622702 SGK494L7N484 410 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 PCDH7O60245 1069 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 SNX3O60493 162 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 STK17BO94768 372 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 ARFIP2P53365 341 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 CLN3Q13286 438 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 COL9A2Q14055 689 aaPredicted RBP18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 NXNQ6DKJ4 435 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 MRM1Q6IN84 353 aaKnown RBP18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 DTX1Q86Y01 620 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 C10orf82Q8WW14 230 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 CCT8L2Q96SF2 557 aa18.77■□□□□ 0.59
PDLIM2-221ENST00000622702 ZNF860A6NHJ4 632 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 MEN1O00255 615 aa18.76■□□□□ 0.59
PDLIM2-221ENST00000622702 TMPRSS11DO60235 418 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms