RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MYLKQ15746 1914 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 GLYATL1P3A0A0U1RQE8 302 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 MBLAC1A4D2B0 266 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 MYADML2A6NDP7 307 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 SLC28A1O00337 649 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 EIF3GO75821 320 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS11-207ENST00000620429 S100A8P05109 93 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 HGFP14210 728 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 NCF1P14598 390 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 HPGDP15428 266 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 TGM4P49221 684 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 FGL2Q14314 439 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 MPEG1Q2M385 716 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 HECTD2Q5U5R9 776 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 KIAA0930Q6ICG6 404 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 ALKBH2Q6NS38 261 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 SPATA19Q7Z5L4 167 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 RYBPQ8N488 228 aaPredicted RBP9.97□□□□□ -0.81
VPS11-207ENST00000620429 CAMKVQ8NCB2 501 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS11-207ENST00000620429 TWIST2Q8WVJ9 160 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 GGHQ92820 318 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 TSPAN17Q96FV3 270 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 COQ10AQ96MF6 247 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 GLOD4Q9HC38 313 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 SLCO1C1Q9NYB5 712 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 SPASTQ9UBP0 616 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 PFDN2Q9UHV9 154 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 GABRQQ9UN88 632 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 ERVK-19Q9WJR5 959 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 NCKAP1Q9Y2A7 1128 aa9.97□□□□□ -0.81
VPS11-207ENST00000620429 SMIM35A0A1B0GVV1 85 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 C7orf66A4D0T2 115 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ARGFXA6NJG6 315 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 M0R233 179 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 AKAP8O43823 692 aaKnown RBP9.96□□□□□ -0.81
VPS11-207ENST00000620429 VPS4BO75351 444 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 PTAFRP25105 342 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ITGB8P26012 769 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 HOXC13P31276 330 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ATP5C1P36542 298 aaKnown RBP9.96□□□□□ -0.81
VPS11-207ENST00000620429 PREPP48147 710 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ALDH9A1P49189 494 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 MAN2A2P49641 1150 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 AFF1P51825 1210 aaKnown RBP9.96□□□□□ -0.81
VPS11-207ENST00000620429 FOXA1P55317 472 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 C2orf80Q0P641 193 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 PTPRRQ15256 657 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 FAM76BQ5HYJ3 339 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 TRIQKQ629K1 86 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 FUT10Q6P4F1 479 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 SUSD1Q6UWL2 747 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 C17orf99Q6UX52 265 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 DLEU7Q6UYE1 221 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 RHOUQ7L0Q8 258 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 OR6C4Q8NGE1 309 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 C9orf43Q8TAL5 461 aaPredicted RBP9.96□□□□□ -0.81
VPS11-207ENST00000620429 GTF3AQ92664 365 aaKnown RBP9.96□□□□□ -0.81
VPS11-207ENST00000620429 ELP4Q96EB1 424 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 L3HYPDHQ96EM0 354 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 PPP3R2Q96LZ3 170 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 TMEM68Q96MH6 324 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ZFP42Q96MM3 310 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ZNF583Q96ND8 569 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ZBTB18Q99592 522 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 TAPBPLQ9BX59 468 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 SLC29A3Q9BZD2 475 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 TKTL2Q9H0I9 626 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 WDCPQ9H6R7 721 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 SYNDIG1Q9H7V2 258 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 ABCB9Q9NP78 766 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 TREX1Q9NSU2 369 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 HCN3Q9P1Z3 774 aa9.96□□□□□ -0.81
VPS11-207ENST00000620429 NDRG2Q9UN36 371 aaKnown RBP9.96□□□□□ -0.81
VPS11-207ENST00000620429 LRRC14BA6NHZ5 514 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 AZIN1O14977 448 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 OR4F21O95013 312 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 SIX3O95343 332 aaPredicted RBP9.96□□□□□ -0.82
VPS11-207ENST00000620429 LINC00032P0C843 101 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 PRF1P14222 555 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 SSTR2P30874 369 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 GEMP55040 296 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 CAMK2DQ13557 499 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 SF3A2Q15428 464 aaKnown RBP9.96□□□□□ -0.82
VPS11-207ENST00000620429 MICBQ29980 383 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 ZNF284Q2VY69 593 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 NOMO2Q5JPE7 1267 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 KANK2Q63ZY3 851 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 OR4F3Q6IEY1 312 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 CLEC20AQ6ZU45 233 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 PAQR7Q86WK9 346 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 UXS1Q8NBZ7 420 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 OR11H7Q8NGC8 314 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 EDEM1Q92611 657 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 UBE2FQ969M7 185 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 DIRAS2Q96HU8 199 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 ZNF285Q96NJ3 590 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 MOGAT1Q96PD6 335 aa9.96□□□□□ -0.82
VPS11-207ENST00000620429 SLC38A2Q96QD8 506 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms