RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ERN2Q76MJ5 926 aaKnown RBP11.59□□□□□ -0.55
SRRT-216ENST00000618262 TRMT11Q7Z4G4 463 aaKnown RBP11.59□□□□□ -0.55
SRRT-216ENST00000618262 BTLAQ7Z6A9 289 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 GPR26Q8NDV2 337 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 OR2T3Q8NH03 318 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 JADE3Q92613 823 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 LRRC39Q96DD0 335 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 CXorf21Q9HAI6 301 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 WARS2Q9UGM6 360 aaKnown RBP11.59□□□□□ -0.55
SRRT-216ENST00000618262 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
SRRT-216ENST00000618262 MRPS17Q9Y2R5 130 aaKnown RBP11.59□□□□□ -0.55
SRRT-216ENST00000618262 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.58□□□□□ -0.55
SRRT-216ENST00000618262 EFCAB10A6NFE3 127 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 UPK3BL1B0FP48 263 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 UPK3BL2E5RIL1 263 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 C1QTNF3-AMACRE9PGA6 284 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 SLC22A2O15244 555 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 SPINT1O43278 529 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 EDF1O60869 148 aaKnown RBP11.58□□□□□ -0.55
SRRT-216ENST00000618262 TYRP1P17643 537 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 OPRL1P41146 370 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 STARD6P59095 220 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 PSPHP78330 225 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 FAM189A2Q15884 450 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 ZNF674Q2M3X9 581 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 ZNF776Q68DI1 518 aaPredicted RBP11.58□□□□□ -0.55
SRRT-216ENST00000618262 DOK6Q6PKX4 331 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 GPRIN3Q6ZVF9 776 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 USP45Q70EL2 814 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 ZNF767PQ75MW2 155 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 AMIGO1Q86WK6 493 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 UBALD2Q8IYN6 164 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 OR13J1Q8NGT2 312 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 OR6F1Q8NGZ6 308 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 HM13Q8TCT9 377 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 SH3YL1Q96HL8 342 aaPredicted RBP11.58□□□□□ -0.55
SRRT-216ENST00000618262 SSX3Q99909 188 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 TBCDQ9BTW9 1192 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 GPR174Q9BXC1 333 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.58□□□□□ -0.55
SRRT-216ENST00000618262 ZNF556Q9HAH1 456 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 TMEM9Q9P0T7 183 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 IFT80Q9P2H3 777 aaPredicted RBP11.58□□□□□ -0.55
SRRT-216ENST00000618262 DMXL1Q9Y485 3027 aa11.58□□□□□ -0.55
SRRT-216ENST00000618262 A0A1B0GTW7 788 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 OR1I1O60431 355 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 PCCBP05166 539 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 FGF1P05230 155 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 HLA-DPA1P20036 260 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 GABRB3P28472 473 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 RAB13P51153 203 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 EOGTQ5NDL2 527 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 NKAPQ8N5F7 415 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 CLDN19Q8N6F1 224 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 S100ZQ8WXG8 99 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 EDAQ92838 391 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 TADA1Q96BN2 335 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 SCRN2Q96FV2 425 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 NSMCE2Q96MF7 247 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 THTPAQ9BU02 230 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 IL22Q9GZX6 179 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 SLC22A4Q9H015 551 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 MIR1-1HGQ9H1L0 117 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 CAB39LQ9H9S4 337 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 FBXO6Q9NRD1 293 aaPredicted RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 CCDC59Q9P031 241 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 ZFR2Q9UPR6 939 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 PPIL1Q9Y3C6 166 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 OR1A2Q9Y585 309 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 PCDHGA9Q9Y5G4 932 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 EP300Q09472 2414 aaPredicted RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 TMEM210A6NLX4 147 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 A8MXE2 369 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 B2RBV5 119 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 GOT2P00505 430 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 IMPDH1P20839 514 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 PCGF2P35227 344 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 MRPS21P82921 87 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 FOXO1Q12778 655 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 USP10Q14694 798 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 AASDHQ4L235 1098 aaPredicted RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 PIP5KL1Q5T9C9 394 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 AGBL4Q5VU57 503 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 MLIPQ5VWP3 458 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 ZNF470Q6ECI4 717 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 TDRPQ86YL5 185 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 TMEFF1Q8IYR6 380 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 ACVR1CQ8NER5 493 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 SETD7Q8WTS6 366 aaKnown RBP11.58□□□□□ -0.56
SRRT-216ENST00000618262 TCEAL3Q969E4 200 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 ZBTB18Q99592 522 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 GABRG3Q99928 467 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 B3GNT2Q9NY97 397 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 GPR52Q9Y2T5 361 aa11.58□□□□□ -0.56
SRRT-216ENST00000618262 DHRS7Q9Y394 339 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms