RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MANSC1Q9H8J5 431 aa8.46□□□□□ -1.05
VPS11-206ENST00000614944 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.05
VPS11-206ENST00000614944 MARCH4Q9P2E8 410 aaPredicted RBP8.46□□□□□ -1.05
VPS11-206ENST00000614944 ZNF69Q9UC07 566 aa8.46□□□□□ -1.05
VPS11-206ENST00000614944 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.05
VPS11-206ENST00000614944 PCDHGA7Q9Y5G6 932 aa8.46□□□□□ -1.05
VPS11-206ENST00000614944 TNPO3Q9Y5L0 923 aaKnown RBP8.46□□□□□ -1.05
VPS11-206ENST00000614944 LRRK1Q38SD2 2015 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 SHISA7A6NL88 538 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 AKAP8O43823 692 aaKnown RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 PLIN3O60664 434 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 C2P06681 752 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 GNAO1P09471 354 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 ZNF7P17097 686 aaPredicted RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 ADH7P40394 386 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 CCT3P49368 545 aaKnown RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 RAB4BP61018 213 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 MPP1Q00013 466 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 TIAL1Q01085 375 aaKnown RBP eCLIP8.46□□□□□ -1.06
VPS11-206ENST00000614944 TDGQ13569 410 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 GBX1Q14549 363 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 AAK1Q2M2I8 961 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 ARMCX4Q5H9R4 360 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 KANK2Q63ZY3 851 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 ZNF776Q68DI1 518 aaPredicted RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 SERPINA13PQ6UXR4 307 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 KDELC2Q7Z4H8 507 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 DPPA2Q7Z7J5 298 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 COMMD7Q86VX2 200 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 ADGRG3Q86Y34 549 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 FBXW8Q8N3Y1 598 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 RYBPQ8N488 228 aaPredicted RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 CELF2-AS1Q8N7Q2 184 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 OR7G3Q8NG95 312 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 OR5T2Q8NGG2 359 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 PNPT1Q8TCS8 783 aaKnown RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 FUBP1Q96AE4 644 aaKnown RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 ARRDC3Q96B67 414 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 CCDC126Q96EE4 140 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 KCTD14Q9BQ13 255 aaPredicted RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 MENTQ9BUN1 341 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 PIGUQ9H490 435 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 EMCNQ9ULC0 261 aa8.46□□□□□ -1.06
VPS11-206ENST00000614944 CNOT6Q9ULM6 557 aaKnown RBP8.46□□□□□ -1.06
VPS11-206ENST00000614944 A0A096LPK6 155 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 GPR89AB7ZAQ6 455 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 IPO13O94829 963 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 SORBS2O94875 1100 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 HOXC4P09017 264 aaPredicted RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 ALPIP09923 528 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 GPR89BP0CG08 455 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ADRB3P13945 408 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ZNF26P17031 533 aaPredicted RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 IGFBP4P22692 258 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 POU1F1P28069 291 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 MAPK9P45984 424 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 GNG10P50151 68 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 SLC7A2P52569 658 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 RGS1Q08116 209 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 MESP2Q0VG99 397 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ARHGEF7Q14155 803 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 PON3Q15166 354 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 PAN3Q58A45 887 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 EOGTQ5NDL2 527 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ZNF549Q6P9A3 640 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 TFAP2EQ6VUC0 442 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ZNF574Q6ZN55 896 aaPredicted RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 GPALPP1Q8IXQ4 340 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 NXPE1Q8N323 547 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 TMEM151AQ8N4L1 468 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 NKAPQ8N5F7 415 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 CA5BP1Q8WTZ4 195 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 DTD2Q96FN9 168 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 QRFPRQ96P65 431 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 BRINP2Q9C0B6 783 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 DERL2Q9GZP9 239 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 LDAHQ9H6V9 325 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ASH2LQ9UBL3 628 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 BAIAP2Q9UQB8 552 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 TMEM82A0PJX8 343 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 FAM221BA6H8Z2 402 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 MFSD2BA6NFX1 497 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 ANGPT2O15123 496 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 TIPRLO75663 272 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 SLC22A5O76082 557 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 CLDN7O95471 211 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 BPGMP07738 259 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 TRAPPC2P0DI81 140 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 TRAPPC2BP0DI82 140 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 CLUP10909 449 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 PRF1P14222 555 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 PKMP14618 531 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 MSH3P20585 1137 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 RPL10P27635 214 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 GPX4P36969 197 aaPredicted RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 PIK3CBP42338 1070 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 CTBP1Q13363 440 aa8.45□□□□□ -1.06
VPS11-206ENST00000614944 USP10Q14694 798 aaKnown RBP8.45□□□□□ -1.06
VPS11-206ENST00000614944 EIF2S3LQ2VIR3 472 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms