RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MRTO4Q9UKD2 239 aaKnown RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 GABARAPO95166 117 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ALPLP05186 524 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 PLK1P53350 603 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ARHGAP1Q07960 439 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 FSTL4Q6MZW2 842 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 MTFR2Q6P444 385 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 OR2AP1Q8NGE2 309 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 SFT2D1Q8WV19 159 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 VRK1Q99986 396 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TBL1YQ9BQ87 522 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 CNTN6Q9UQ52 1028 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 FNDC3AQ9Y2H6 1198 aaKnown RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 GATBO75879 557 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 KCNK2O95069 426 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ATP5C1P36542 298 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CDKN2BP42772 138 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PFKPQ01813 784 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 EMX1Q04741 257 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RELQ04864 619 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SMARCD3Q6STE5 483 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 LRRTM3Q86VH5 581 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OSTM1Q86WC4 334 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MTURNQ8N3F0 131 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CSPG4P5Q96PW8 444 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ADGRE3Q9BY15 652 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 AKTIPQ9H8T0 292 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SLC22A11Q9NSA0 550 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 UXTQ9UBK9 157 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 HTR1EP28566 365 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CYS1Q717R9 158 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NLRC3Q7RTR2 1065 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SUMF2Q8NBJ7 301 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR6C4Q8NGE1 309 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RXFP2Q8WXD0 754 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ARL5AQ9Y689 179 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SPAG17Q6Q759 2223 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MT-ND4LP03901 98 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ALDOBP05062 364 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 HOXA13P31271 388 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 AP1S1P61966 158 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CD47Q08722 323 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RNASE10Q5GAN6 216 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SAPCD1Q5SSQ6 148 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM198Q66K66 360 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ENPP7Q6UWV6 458 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MOB1BQ7L9L4 216 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 COMMD4Q9H0A8 199 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ZBTB20Q9HC78 741 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 IMP3Q9NV31 184 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NPC1O15118 1278 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ENTPD3O75355 529 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ADORA2AP29274 412 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SSTR2P30874 369 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 H3F3CQ6NXT2 135 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CMASQ8NFW8 434 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PDXPQ96GD0 296 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 AMBNQ9NP70 447 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 PCDHGA7Q9Y5G6 932 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FAM170BA6NMN3 283 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FAM155BO75949 473 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RPP14O95059 124 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ARSBP15848 533 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SLC10A7Q0GE19 358 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 P4HA3Q7Z4N8 544 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 B3GALNT2Q8NCR0 500 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR52H1Q8NGJ2 320 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 WWTR1Q9GZV5 400 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TLR8Q9NR97 1041 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM260Q9NX78 707 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CXXC1Q9P0U4 656 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MYH14Q7Z406 1995 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CHRM5P08912 532 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CLEC2LP0C7M8 214 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ACADMP11310 421 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 KIR3DL1P43629 444 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 SPHARQ15513 63 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR10H5Q8NGA6 315 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 HLA-CQ95604 372 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MGLLQ99685 303 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 OR11A1Q9GZK7 315 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MEAF6Q9HAF1 191 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TSR3Q9UJK0 312 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 AHDC1Q5TGY3 1603 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 AKR7A2O43488 359 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ACSM4P0C7M7 580 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FGF7P21781 194 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RENBPP51606 427 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF177Q13360 481 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 GUK1Q16774 197 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 MFSD9Q8NBP5 474 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 FAM163AQ96GL9 167 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 TCF25Q9BQ70 676 aa4.78□□□□□ -1.64
VPS13D-213ENST00000613099 NIFKQ9BYG3 293 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 RTCAO00442 366 aaKnown RBP4.78□□□□□ -1.64
VPS13D-213ENST00000613099 CSF3P09919 207 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms