RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 XPR1Q9UBH6 696 aa11.6□□□□□ -0.55
CBWD3-208ENST00000612050 ZNF462Q96JM2 2506 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 IGHV3-20A0A0C4DH32 117 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 HMX2A2RU54 273 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 CDK2AP1O14519 115 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 FCHO1O14526 889 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 KLK8O60259 260 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 B3GALT4O96024 378 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 TGFB1P01137 390 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 IFNA16P05015 189 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 ITGAMP11215 1152 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 MTHFD2P13995 350 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 PTX3P26022 381 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-208ENST00000612050 EEF1DP29692 281 aaKnown RBP11.59□□□□□ -0.55
CBWD3-208ENST00000612050 GMPRP36959 345 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 MAGEA12P43365 314 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 ARFIP1P53367 373 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 PCDH1Q08174 1060 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 STX4Q12846 297 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 IFT88Q13099 833 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 SLC29A2Q14542 456 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 ADPRMQ3LIE5 342 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 KHDRBS2Q5VWX1 349 aaKnown RBP11.59□□□□□ -0.55
CBWD3-208ENST00000612050 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 GOLGA7Q7Z5G4 137 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 CISD2Q8N5K1 135 aaKnown RBP11.59□□□□□ -0.55
CBWD3-208ENST00000612050 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
CBWD3-208ENST00000612050 OR1N1Q8NGS0 311 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 ACMSDQ8TDX5 336 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 HAS2Q92819 552 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 F2RL3Q96RI0 385 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 MS4A8Q9BY19 250 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 WDR41Q9HAD4 459 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 LYRM4Q9HD34 91 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 AHSPQ9NZD4 102 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 PHF11Q9UIL8 331 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 ZNF490Q9ULM2 529 aaPredicted RBP11.59□□□□□ -0.55
CBWD3-208ENST00000612050 STK38LQ9Y2H1 464 aa11.59□□□□□ -0.55
CBWD3-208ENST00000612050 DOCK10Q96BY6 2186 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 TLN1Q9Y490 2541 aaKnown RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 OR5H15A6NDH6 313 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 SAGE2PA6NJ88 616 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 H0YIV9 168 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 MLYCDO95822 493 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 OTCP00480 354 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 COX7A2P14406 83 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 KRT15P19012 456 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 CERS1P27544 350 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 PPP2R1BP30154 601 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 BUD31P41223 144 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 SLC26A5P58743 744 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 SERTAD2Q14140 314 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 E2F2Q14209 437 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 CPSF6Q16630 551 aaKnown RBP eCLIP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 FHL5Q5TD97 284 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 RPUSD3Q6P087 351 aaKnown RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 CYP20A1Q6UW02 462 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 SLC22A9Q8IVM8 553 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 LGI4Q8N135 537 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 TMEM132CQ8N3T6 1108 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 FAM47BQ8NA70 645 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 Q8NA96 180 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 HUS1BQ8NHY5 278 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 ZNF473Q8WTR7 871 aaKnown RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 TSLPQ969D9 159 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 SNRNP40Q96DI7 357 aaKnown RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 UTP23Q9BRU9 249 aaKnown RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 L2HGDHQ9H9P8 463 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 ZBTB20Q9HC78 741 aaPredicted RBP11.58□□□□□ -0.56
CBWD3-208ENST00000612050 NMRK1Q9NWW6 199 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 DCDC2Q9UHG0 476 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 DAPP1Q9UN19 280 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 TSC22D4Q9Y3Q8 395 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 CLCA3PQ9Y6N3 262 aa11.58□□□□□ -0.56
CBWD3-208ENST00000612050 TCRBV16S1A1N1A0A5B0 115 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 ARHGAP10A1A4S6 786 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CCDC151A5D8V7 595 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 E2F3O00716 465 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CRYABP02511 175 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 GSTA1P08263 222 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 TNNI3P19429 210 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CD22P20273 847 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 MAOAP21397 527 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 HIST1H1TP22492 207 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CPN2P22792 545 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 SOX11P35716 441 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CLCN2P51788 898 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 LIM2P55344 173 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 BTG2P78543 158 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 OC90Q02509 493 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 BIKQ13323 160 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 TERF2Q15554 542 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 ACER2Q5QJU3 275 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 DEPDC1Q5TB30 811 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 OR4C11Q6IEV9 310 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 TIFABQ6ZNK6 161 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 MILR1Q7Z6M3 343 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CUZD1Q86UP6 607 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms