RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SMPDL3AQ92484 453 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 TAF15Q92804 592 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 GGHQ92820 318 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 BCL2L2Q92843 193 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 SLC35C1Q96A29 364 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 ULK4Q96C45 1275 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 CNRIP1Q96F85 164 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 EPSTI1Q96J88 318 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 CABS1Q96KC9 395 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 SYT11Q9BT88 431 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 MCRIP2Q9BUT9 160 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 LRRC2Q9BYS8 371 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 XPO4Q9C0E2 1151 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 WWTR1Q9GZV5 400 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 UPF3AQ9H1J1 476 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 NLGN3Q9NZ94 848 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 BAIAP2L1Q9UHR4 511 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 ISY1Q9ULR0 285 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 IQCMA0A1B0GVH7 501 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM64CA6NLI5 447 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 MPTX1A8MV57 137 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 LMO7DNF2Z398 122 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 TLX2O43763 284 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 MTRF1O75570 445 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 GAS8O95995 478 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 ACKR3P25106 362 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 GJB2P29033 226 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 VEGFCP49767 419 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 TMEM50BP56557 158 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 LCP2Q13094 533 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 GPR50Q13585 617 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 STXBP2Q15833 593 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 MOGAT2Q3SYC2 334 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 C14orf177Q52M58 125 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 FASTKD1Q53R41 847 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 LYPLAL1Q5VWZ2 237 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 PLPP4Q5VZY2 271 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 LCLAT1Q6UWP7 414 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 Q71RC1 249 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 PRSS42Q7Z5A4 293 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 ELMOD1Q8N336 334 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 CARNMT1Q8N4J0 409 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 TEX9Q8N6V9 391 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 OR9Q2Q8NGE9 314 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 OR5M9Q8NGP3 310 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 ST7LQ8TDW4 575 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 ATP8B4Q8TF62 1192 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 FAM46BQ96A09 425 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 CFAP36Q96G28 342 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 PDLIM5Q96HC4 596 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 CCM2Q9BSQ5 444 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM7Q9C029 511 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 VIPAS39Q9H9C1 493 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 MID1IP1Q9NPA3 183 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 MIS18AQ9NYP9 233 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 THEGQ9P2T0 379 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 ETV7Q9Y603 341 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 ZHX2Q9Y6X8 837 aa3.62□□□□□ -1.83
SMCHD1-213ENST00000609587 LOC105371242A0A075B767 164 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 MEX3AA1L020 520 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 K7EQD1 137 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 RNF103O00237 685 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 SYT7O43581 403 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 HMOX1P09601 288 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM49P0CI25 452 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM49CP0CI26 452 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 SKILP12757 684 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 DPEP1P16444 411 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 AOC1P19801 751 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 EDNRAP25101 427 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 LUMP51884 338 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 SMSP52788 366 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 UBXN1Q04323 297 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 ACTN3Q08043 901 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 RPA4Q13156 261 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 PPP2R5CQ13362 524 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 FASTKD3Q14CZ7 662 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 PKN2Q16513 984 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 TMEM64Q6YI46 380 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 HSCBQ8IWL3 235 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 METTL4Q8N3J2 472 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 NAT8LQ8N9F0 302 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 OR10G7Q8NGN6 311 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 C11orf45Q8TAV5 145 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 SPATA18Q8TC71 538 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 SNX21Q969T3 373 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF274Q96GC6 653 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 C5orf30Q96GV9 206 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 ATXN7L3BQ96GX2 97 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 AGAP3Q96P47 875 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 AGAP4Q96P64 663 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 DDX50Q9BQ39 737 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM51Q9BSJ1 452 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 MRPL9Q9BYD2 267 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 FNDC4Q9H6D8 234 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 MAGEF1Q9HAY2 307 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 NDE1Q9NXR1 346 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF319Q9P2F9 582 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 EPS15L1Q9UBC2 864 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms