RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 FRG1Q14331 258 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 SLBPQ14493 270 aaKnown RBP eCLIP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 TERF2Q15554 542 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 CMPK2Q5EBM0 449 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 C16orf47Q6ZP98 133 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 CEP128Q6ZU80 1094 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 FRA10AC1Q70Z53 315 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 CD163Q86VB7 1156 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 KLHDC8AQ8IYD2 350 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 TTLQ8NG68 377 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 NCLNQ969V3 563 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 RHBDF1Q96CC6 855 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 VMP1Q96GC9 406 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 CCDC77Q9BR77 488 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 ENKD1Q9H0I2 346 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 LIN28AQ9H9Z2 209 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 MOCS1Q9NZB8 636 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 KCMF1Q9P0J7 381 aa12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-219ENST00000608621 MYOCOSA0A1B0GUC4 107 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ANKDD1BA6NHY2 528 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 NCF1BA6NI72 391 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 NCF1CA8MVU1 366 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 TAPBPO15533 448 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ZSCAN12O43309 604 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 B3GALT2O43825 422 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ZFAND5O76080 213 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 PDE9AO76083 593 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 NCF1P14598 390 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 TCP1P17987 556 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 SSR4P51571 173 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 PLA2G16P53816 162 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 DR1Q01658 176 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 PDIA2Q13087 525 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 FASTKD3Q14CZ7 662 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 MEX3BQ6ZN04 569 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ADAMTSL2Q86TH1 951 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ZNF595Q8IYB9 648 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 KRT78Q8N1N4 520 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 SPATA6LQ8N4H0 392 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ZFP62Q8NB50 900 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 FBXO36Q8NEA4 188 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 OR52N2Q8NGI0 321 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 VPS39Q96JC1 886 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 CAPZA3Q96KX2 299 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 QRFPRQ96P65 431 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 CAPS2Q9BXY5 557 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 DEFB127Q9H1M4 99 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 NT5DC2Q9H857 520 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 DEPPQ9NTK1 212 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ZNF490Q9ULM2 529 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 ERVK-11Q9UQG0 969 aa12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 YARS2Q9Y2Z4 477 aaKnown RBP12.46□□□□□ -0.41
POLR2J3-219ENST00000608621 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
POLR2J3-219ENST00000608621 F8P00451 2351 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 TMEM200CA6NKL6 621 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 CLEC3AO75596 197 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 PIAS1O75925 651 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 SEC31AO94979 1220 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 IFNA16P05015 189 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 CAPN3P20807 821 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 NR0B1P51843 470 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 TLE4Q04727 773 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 BMPR2Q13873 1038 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 TGFBIQ15582 683 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 FBXO48Q5FWF7 155 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 XKR6Q5GH73 641 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 TMEM211Q6ICI0 200 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 IL20RBQ6UXL0 311 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 VN1R5Q7Z5H4 357 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 CLNKQ7Z7G1 428 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 TMEM132CQ8N3T6 1108 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 MARVELD2Q8N4S9 558 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 FAM47BQ8NA70 645 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 ACBD4Q8NC06 268 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 OR2L5Q8NG80 312 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 CHTF18Q8WVB6 975 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 SREK1Q8WXA9 508 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 ESAMQ96AP7 390 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 REXO4Q9GZR2 422 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 RHOJQ9H4E5 214 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 ADAP2Q9NPF8 381 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 MRPS33Q9Y291 106 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 MTO1Q9Y2Z2 717 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 CSMD2Q7Z408 3487 aa12.45□□□□□ -0.42
POLR2J3-219ENST00000608621 ZNF407Q9C0G0 2248 aa12.44□□□□□ -0.42
POLR2J3-219ENST00000608621 A0A088AWK7 358 aa12.44□□□□□ -0.42
POLR2J3-219ENST00000608621 PINLYPA6NC86 204 aa12.44□□□□□ -0.42
POLR2J3-219ENST00000608621 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
POLR2J3-219ENST00000608621 A8MVJ9 347 aa12.44□□□□□ -0.42
POLR2J3-219ENST00000608621 CYR61O00622 381 aa12.44□□□□□ -0.42
POLR2J3-219ENST00000608621 CLGNO14967 610 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms