RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 VPS11Q9H270 941 aa18.08■□□□□ 0.48
SGMS1-208ENST00000608287 TEKT2Q9UIF3 430 aa18.08■□□□□ 0.48
SGMS1-208ENST00000608287 MKL2Q9ULH7 1088 aa18.08■□□□□ 0.48
SGMS1-208ENST00000608287 MEMO1Q9Y316 297 aa18.08■□□□□ 0.48
SGMS1-208ENST00000608287 ZNF860A6NHJ4 632 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 PRAMEF2O60811 474 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 BMP10O95393 424 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 PRR35P0CG20 571 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 MST1P26927 711 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 SLBPQ14493 270 aaKnown RBP eCLIP18.07■□□□□ 0.48
SGMS1-208ENST00000608287 C3AR1Q16581 482 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 PDK4Q16654 411 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 MFSD4BQ5TF39 518 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 ABHD13Q7L211 337 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 NDUFAF7Q7L592 441 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 ACBD4Q8NC06 268 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 CA5BP1Q8WTZ4 195 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 PHF10Q8WUB8 498 aaKnown RBP18.07■□□□□ 0.48
SGMS1-208ENST00000608287 CD244Q9BZW8 370 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 FBN3Q75N90 2809 aa18.07■□□□□ 0.48
SGMS1-208ENST00000608287 URADA6NGE7 173 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 SYCE1LA8MT33 242 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 KLHL2O95198 593 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 ZNF888P0CJ79 500 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-208ENST00000608287 ALOX12P18054 663 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 HNF4AP41235 474 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 XCR1P46094 333 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 SKP1P63208 163 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 ACAP2Q15057 778 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 DEFB134Q4QY38 66 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 XKR6Q5GH73 641 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 KLC3Q6P597 504 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 TMIGD1Q6UXZ0 262 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 Q6ZPB1 254 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-208ENST00000608287 LRRC70Q7Z2Q7 622 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.06■□□□□ 0.487e-7■■■■■ 59.7
SGMS1-208ENST00000608287 KRT78Q8N1N4 520 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 AFAP1L2Q8N4X5 818 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 RHEBL1Q8TAI7 183 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 BRIX1Q8TDN6 353 aaKnown RBP18.06■□□□□ 0.48
SGMS1-208ENST00000608287 TREX2Q9BQ50 279 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-208ENST00000608287 SLC24A3Q9HC58 644 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 RIC8BQ9NVN3 520 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 PLA2G3Q9NZ20 509 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 COQ3Q9NZJ6 369 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 TINAGQ9UJW2 476 aa18.06■□□□□ 0.48
SGMS1-208ENST00000608287 EXOC1LA0A1B0GW35 172 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 OR5H15A6NDH6 313 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 GALR3O60755 368 aaPredicted RBP18.05■□□□□ 0.48
SGMS1-208ENST00000608287 B3GALT4O96024 378 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 FAM153BP0C7A2 387 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 ICAM2P13598 275 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 CNTFP26441 200 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 AGTR2P50052 363 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 RAB8AP61006 207 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 EEF1A2Q05639 463 aaKnown RBP18.05■□□□□ 0.48
SGMS1-208ENST00000608287 FAM153CQ494X1 144 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 MINDY4Q4G0A6 757 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 TOR1AIP1Q5JTV8 583 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 ABHD17BQ5VST6 288 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 TRMT10CQ7L0Y3 403 aaKnown RBP18.05■□□□□ 0.48
SGMS1-208ENST00000608287 SPPL2CQ8IUH8 684 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 SHISA5Q8N114 240 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 TTLQ8NG68 377 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 OR5T3Q8NGG3 340 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 DCAKDQ8WVC6 231 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 CCT6BQ92526 530 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 SLC6A16Q9GZN6 736 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 EHD1Q9H4M9 534 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 L2HGDHQ9H9P8 463 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 OPTCQ9UBM4 332 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 ASB1Q9Y576 335 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 CPAMD8Q8IZJ3 1885 aa18.05■□□□□ 0.48
SGMS1-208ENST00000608287 CCDC189A1A4V9 331 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 RIPK2O43353 540 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 SERPINA6P08185 405 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 ABHD2P08910 425 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 GFAPP14136 432 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 IRF8Q02556 426 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 HYAL2Q12891 473 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 DOC2AQ14183 400 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 TEX35Q5T0J7 233 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 NIPAL1Q6NVV3 410 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 TGIF2LYQ8IUE0 185 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 GSPT2Q8IYD1 628 aaKnown RBP18.04■□□□□ 0.48
SGMS1-208ENST00000608287 ADAMTS18Q8TE60 1221 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 UTP15Q8TED0 518 aaKnown RBP18.04■□□□□ 0.48
SGMS1-208ENST00000608287 CREB3L4Q8TEY5 395 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 METTL21AQ8WXB1 218 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 PTCD3Q96EY7 689 aaKnown RBP18.04■□□□□ 0.48
SGMS1-208ENST00000608287 PEX11GQ96HA9 241 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 RBCK1Q9BYM8 510 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 PITHD1Q9GZP4 211 aaPredicted RBP18.04■□□□□ 0.48
SGMS1-208ENST00000608287 VN1R1Q9GZP7 353 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 KLHL31Q9H511 634 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 NT5DC2Q9H857 520 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 ZNF180Q9UJW8 692 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 ZNF835Q9Y2P0 537 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 PCDHGB6Q9Y5F9 930 aa18.04■□□□□ 0.48
SGMS1-208ENST00000608287 ANKDD1BA6NHY2 528 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms