RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 POMKQ9H5K3 350 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PPP1R3EQ9H7J1 279 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRIM45Q9H8W5 580 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACTR8Q9H981 624 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CAB39LQ9H9S4 337 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZBTB20Q9HC78 741 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMURF1Q9HCE7 757 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 AGO4Q9HCK5 861 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ITM2CQ9NQX7 267 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACSS2Q9NR19 701 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 INTS7Q9NVH2 962 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 GTSE1Q9NYZ3 720 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPRC5BQ9NZH0 403 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 TFCP2L1Q9NZI6 479 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF224Q9NZL3 707 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CNOT2Q9NZN8 540 aaKnown RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SH3BP4Q9P0V3 963 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 RBPJLQ9UBG7 517 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 XPR1Q9UBH6 696 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ASH2LQ9UBL3 628 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SPASTQ9UBP0 616 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 SEC14L4Q9UDX3 406 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYB5R1Q9UHQ9 305 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PNMA8BQ9ULN7 279 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 COPS3Q9UNS2 423 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAN2B2Q9Y2E5 1009 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 PKP3Q9Y446 797 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CMAHPQ9Y471 501 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ASB1Q9Y576 335 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 DNAJC15Q9Y5T4 150 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDH10Q9Y6N8 788 aa3.91□□□□□ -1.78
HMGB1P50-201ENST00000605814 ROBO1Q9Y6N7 1651 aa3.9□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANK1P16157 1881 aa3.9□□□□□ -1.78
HMGB1P50-201ENST00000605814 STRCP1A6NGW2 1772 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 hCG_1807616A0A1W2PRN6 198 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 C2orf81A6NN90 581 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 WASHC1A8K0Z3 465 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 A8MV72 311 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM233B4DJY2 109 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF670-ZNF695F2Z2N8 137 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 DNASE2O00115 360 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 POLRMTO00411 1230 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 KPNA3O00505 521 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 GNGT2O14610 69 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 HNRNPDLO14979 420 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 CASC3O15234 703 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 FOXS1O43638 330 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 KIAA0513O60268 411 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAD1O60671 282 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCO1O75880 301 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 SOX30O94993 753 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 APOL3O95236 402 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 GLUD1P00367 558 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 CFBP00751 764 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 HLA-DOAP06340 250 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 PROS1P07225 676 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 FGF2P09038 288 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRKAR1AP10644 381 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 PIPP12273 146 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 LCP1P13796 627 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 HNRNPLP14866 589 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 DARSP14868 501 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARSBP15848 533 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 NCK1P16333 377 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 GABRB1P18505 474 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 FPR1P21462 350 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 IGFBP5P24593 272 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 YWHAQP27348 245 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 ALDH4A1P30038 563 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 HOXA9P31269 272 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 FMO3P31513 532 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 GRK5P34947 590 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 NUP62P37198 522 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPS19P39019 145 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 MEOX2P50222 304 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 GZMMP51124 257 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 DAPP51397 102 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 HK3P52790 923 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 AIF1P55008 147 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 TAS2R39P59534 338 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 HERVK_113P63132 956 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 ERVK-8P63133 956 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPP38P78345 283 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 ABATP80404 500 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC6A3Q01959 620 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 DHODHQ02127 395 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 FPGSQ05932 587 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 DBPQ10586 325 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 NPRL3Q12980 569 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRKG2Q13237 762 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 SP140Q13342 867 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 BTN1A1Q13410 526 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 CAPRIN1Q14444 709 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 GRB7Q14451 532 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 MXD4Q14582 209 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCTD2Q14681 263 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 LARS2Q15031 903 aaKnown RBP3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 KIAA0040Q15053 153 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 NCF4Q15080 339 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms