RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 TMIGD1Q6UXZ0 262 aa16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 NCLNQ969V3 563 aa16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 C14orf79Q96F83 325 aa16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 PNO1Q9NRX1 252 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 DEPPQ9NTK1 212 aa16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 ADGRG4Q8IZF6 3080 aa16.76■□□□□ 0.27
CHMP2A-208ENST00000601220 CYR61O00622 381 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 HS6ST1O60243 411 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 WDR47O94967 919 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 SEC31AO94979 1220 aaKnown RBP16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 PTGS2P35354 604 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 ARL4CP56559 192 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 RAB38P57729 211 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 XKR6Q5GH73 641 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 ADNP2Q6IQ32 1131 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 C16orf47Q6ZP98 133 aaPredicted RBP16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 ADAMTSL2Q86TH1 951 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 OR52N2Q8NGI0 321 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 VMP1Q96GC9 406 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 SEC16BQ96JE7 1060 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 EGFL8Q99944 293 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 TMEM79Q9BSE2 394 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 PRTFDC1Q9NRG1 225 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 SMYD2Q9NRG4 433 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 CTNNAL1Q9UBT7 734 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 FBXW2Q9UKT8 454 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 ZNF490Q9ULM2 529 aaPredicted RBP16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 PPT2Q9UMR5 302 aa16.75■□□□□ 0.27
CHMP2A-208ENST00000601220 ANKRD17O75179 2603 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TFECO14948 347 aaPredicted RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 ERI3O43414 337 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 H2AFYO75367 372 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 CLEC3AO75596 197 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TCP1P17987 556 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 GSTM2P28161 218 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 GGT5P36269 586 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 GPR85P60893 370 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 DR1Q01658 176 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TESK1Q15569 626 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TGFBIQ15582 683 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 EMC4Q5J8M3 183 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 CD163Q86VB7 1156 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 KLHL7Q8IXQ5 586 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 ZNF595Q8IYB9 648 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 CYP4Z2PQ8N1L4 340 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TMEM156Q8N614 296 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 FBXO36Q8NEA4 188 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TTLQ8NG68 377 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 SDCCAG3Q96C92 435 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 FAR2Q96K12 515 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 CAPZA3Q96KX2 299 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 PITHD1Q9GZP4 211 aaPredicted RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 RHOJQ9H4E5 214 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 POPDC3Q9HBV1 291 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 GPRC5BQ9NZH0 403 aa16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 YARS2Q9Y2Z4 477 aaKnown RBP16.74■□□□□ 0.27
CHMP2A-208ENST00000601220 PINLYPA6NC86 204 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 ZSCAN12O43309 604 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 PIAS1O75925 651 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 IGFBP2P18065 325 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 LIM2P55344 173 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 PDIA2Q13087 525 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 ABHD17CQ6PCB6 329 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 SPATA6LQ8N4H0 392 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 FAM47BQ8NA70 645 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 OR2L5Q8NG80 312 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 PTPMT1Q8WUK0 201 aaPredicted RBP16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 WDR34Q96EX3 536 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 VPS39Q96JC1 886 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 CSF3RQ99062 836 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 DERL2Q9GZP9 239 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 KCNF1Q9H3M0 494 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 EHD1Q9H4M9 534 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 LIN28AQ9H9Z2 209 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 ADAP2Q9NPF8 381 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 PRDM7Q9NQW5 492 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 KCMF1Q9P0J7 381 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 DAPP1Q9UN19 280 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 MTO1Q9Y2Z2 717 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 F8P00451 2351 aa16.73■□□□□ 0.27
CHMP2A-208ENST00000601220 CCDC168Q8NDH2 2452 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 NCF1BA6NI72 391 aaPredicted RBP16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 NCF1CA8MVU1 366 aaPredicted RBP16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 CLDN4O14493 209 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 B3GALT2O43825 422 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 CTNSO60931 367 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 OR2J2O76002 312 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 ZFAND5O76080 213 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 TPOP07202 933 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 NCF1P14598 390 aaPredicted RBP16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 EPORP19235 508 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 CD22P20273 847 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 SSR4P51571 173 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 PLA2G16P53816 162 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 TFF3Q07654 80 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 SLC13A2Q13183 592 aa16.72■□□□□ 0.27
CHMP2A-208ENST00000601220 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms