RNA–Protein interactions for RNA: ENST00000601001.5

PNPLA6-222, Transcript of patatin like phospholipase domain containing 6, human

TSL 3

Gene PNPLA6, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPLA6-222	ENST00000601001	RPS13	P62277	151 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	TLE1	Q04724	770 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	DDX39B	Q13838	428 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	ZRSR2	Q15696	482 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	CPSF6	Q16630	551 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	UNC50	Q53HI1	259 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	SFT2D3	Q587I9	215 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	DEPDC1	Q5TB30	811 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	KHDRBS2	Q5VWX1	349 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	JMJD6	Q6NYC1	403 aa	Predicted RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	MYLK4	Q86YV6	388 aa	Predicted RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	SCUBE1	Q8IWY4	988 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	KBTBD2	Q8IY47	623 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	BRIX1	Q8TDN6	353 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	CAVIN3	Q969G5	261 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	FAR2	Q96K12	515 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	TMEM237	Q96Q45	408 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	SERINC2	Q96SA4	455 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	MTERF1	Q99551	399 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	TUBB6	Q9BUF5	446 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	ZNF717	Q9BY31	904 aa	Predicted RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	PPCS	Q9HAB8	311 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	SEMA4B	Q9NPR2	832 aa	Predicted RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	DAPP1	Q9UN19	280 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	G3BP2	Q9UN86	482 aa	Known RBP	18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	PCDHGA11	Q9Y5H2	935 aa		18.84	■□□□□ 0.61
PNPLA6-222	ENST00000601001	B3GALT2	O43825	422 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	CLDN9	O95484	217 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	JAK1	P23458	1154 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ATP5A1	P25705	553 aa	Known RBP	18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	NEK2	P51955	445 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	LIM2	P55344	173 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	NSDHL	Q15738	373 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	TMEM35A	Q53FP2	167 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ZNF678	Q5SXM1	525 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	LETMD1	Q6P1Q0	360 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	HPS6	Q86YV9	775 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	CMTM7	Q96FZ5	175 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PTCHD1	Q96NR3	888 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	KCNC2	Q96PR1	638 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PARD6B	Q9BYG5	372 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	C12orf65	Q9H3J6	166 aa	Known RBP	18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	LUZP4	Q9P127	313 aa		18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	C19orf25	Q9UFG5	118 aa	Predicted RBP	18.83	■□□□□ 0.6
PNPLA6-222	ENST00000601001	BAHCC1	Q9P281	2608 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	TCRBV16S1A1N1	A0A5B0	115 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001		G3V2L1	256 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001		J3QKU1	62 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PLPP1	O14494	284 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PRMT3	O60678	531 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PROC	P04070	461 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ALPP	P05187	535 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ATP5F1	P24539	256 aa	Predicted RBP	18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	CCNG1	P51959	295 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	HERVK_113	P63132	956 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	GGTA1P	Q4G0N0	100 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	AGAP7P	Q5VUJ5	663 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	B3GNTL1	Q67FW5	361 aa	Predicted RBP	18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PLAG1	Q6DJT9	500 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	EMB	Q6PCB8	327 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PAPD4	Q6PIY7	484 aa	Known RBP	18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	RIPOR1	Q6ZS17	1223 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ACOT4	Q8N9L9	421 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	FAM47B	Q8NA70	645 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	OR4F6	Q8NGB9	312 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	AGAP4	Q96P64	663 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	MAPKAP1	Q9BPZ7	522 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	TBCD	Q9BTW9	1192 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ERVK-6	Q9BXR3	956 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PRDM9	Q9NQV7	894 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ADGRE2	Q9UHX3	823 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	NBAS	A2RRP1	2371 aa		18.82	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PSMD12	O00232	456 aa	Predicted RBP	18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	CDH16	O75309	829 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	GLRA3	O75311	464 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	HIST1H1T	P22492	207 aa	Predicted RBP	18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	HPD	P32754	393 aa	Predicted RBP	18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PRKAA2	P54646	552 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	MLLT10	P55197	1068 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	OR4D2	P58180	307 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	SLC18A2	Q05940	514 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	MFAP5	Q13361	173 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PLEKHN1	Q494U1	663 aa	Predicted RBP	18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PRR30	Q53SZ7	412 aa	Predicted RBP	18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001		Q6ZS92	163 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	CNPY4	Q8N129	248 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	SIRT6	Q8N6T7	355 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PNPLA2	Q96AD5	504 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	LYRM4	Q9HD34	91 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PTGFRN	Q9P2B2	879 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	DCDC2	Q9UHG0	476 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	RAB21	Q9UL25	225 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PPT2	Q9UMR5	302 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001	MMACHC	Q9Y4U1	282 aa		18.81	■□□□□ 0.6
PNPLA6-222	ENST00000601001		A0A088AWK7	358 aa		18.8	■□□□□ 0.6
PNPLA6-222	ENST00000601001	FOXE1	O00358	373 aa	Predicted RBP	18.8	■□□□□ 0.6
PNPLA6-222	ENST00000601001	KLHL41	O60662	606 aa		18.8	■□□□□ 0.6
PNPLA6-222	ENST00000601001	PLIN3	O60664	434 aa		18.8	■□□□□ 0.6
PNPLA6-222	ENST00000601001	KRT15	P19012	456 aa		18.8	■□□□□ 0.6
PNPLA6-222	ENST00000601001	ZNF10	P21506	573 aa	Predicted RBP	18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms