RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CTSBP07858 339 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 LIPCP11150 499 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 ALOX12P18054 663 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 GSTM5P46439 218 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 GYS2P54840 703 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 DDX39BQ13838 428 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 MAP7Q14244 749 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 KIAA0040Q15053 153 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 TBR1Q16650 682 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 SGO1Q5FBB7 561 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 OGFOD2Q6N063 350 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 TRIM40Q6P9F5 258 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 EPGNQ6UW88 154 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 ZNF517Q6ZMY9 492 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 MED25Q71SY5 747 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 PAGE2Q7Z2X7 111 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 DTX1Q86Y01 620 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 LURAP1LQ8IV03 231 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 ZCCHC7Q8N3Z6 543 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 AGR3Q8TD06 166 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 ACTRT2Q8TDY3 377 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 CHTF18Q8WVB6 975 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 CCT6BQ92526 530 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 PMEPA1Q969W9 287 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 PPP3R2Q96LZ3 170 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 QRFPRQ96P65 431 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 F2RL3Q96RI0 385 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 NDC1Q9BTX1 674 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 NPLQ9BXD5 320 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 TRIM55Q9BYV6 548 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 KLHL31Q9H511 634 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 DDX31Q9H8H2 851 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 ACTR5Q9H9F9 607 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 APMAPQ9HDC9 416 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 CUTCQ9NTM9 273 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 WDR70Q9NW82 654 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 PISDQ9UG56 409 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 SLC12A4Q9UP95 1085 aa11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 TMEM184BQ9Y519 407 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-207ENST00000600804 CENPEQ02224 2701 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 A0A1B0GX78 115 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 GMNCA6NCL1 334 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 C9orf172C9J069 976 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 PLPP1O14494 284 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 SDHDO14521 159 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 FOXS1O43638 330 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 GALR3O60755 368 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 CPNE3O75131 537 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 SCRG1O75711 98 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 ITGB2P05107 769 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 JUNP05412 331 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 SERPIND1P05546 499 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 LINC00032P0C843 101 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 TROVE2P10155 538 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 HIST1H1TP22492 207 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 RORAP35398 523 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 BSGP35613 385 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 GNGT1P63211 74 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 IRX1P78414 480 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 PDCD2Q16342 344 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 IMPG1Q17R60 797 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 TOR1AIP1Q5JTV8 583 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 ZNF385CQ66K41 422 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 OR4C11Q6IEV9 310 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 LARP4Q71RC2 724 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 UBE3DQ7Z6J8 389 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 TMEM126BQ8IUX1 230 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 DDIASQ8IXT1 998 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 RNF175Q8N4F7 328 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 OR2T11Q8NH01 316 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 MTFMTQ96DP5 389 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 C3orf30Q96M34 536 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 GBP5Q96PP8 586 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 SERINC2Q96SA4 455 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 NUF2Q9BZD4 464 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 OR51B5Q9H339 312 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 ANKHQ9HCJ1 492 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 LHX9Q9NQ69 397 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 ASIC5Q9NY37 505 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 MARCOQ9UEW3 520 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 MCM8Q9UJA3 840 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 WBP11Q9Y2W2 641 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 FIS1Q9Y3D6 152 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 B3GALT1Q9Y5Z6 326 aa11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 PRRC2CQ9Y520 2896 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-207ENST00000600804 CROCCQ5TZA2 2017 aa11.02□□□□□ -0.64
CHMP2A-207ENST00000600804 C4orf51C9J302 202 aa11.02□□□□□ -0.65
CHMP2A-207ENST00000600804 ERI3O43414 337 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-207ENST00000600804 SKAP2O75563 359 aaPredicted RBP11.02□□□□□ -0.65
CHMP2A-207ENST00000600804 MED26O95402 600 aa11.02□□□□□ -0.65
CHMP2A-207ENST00000600804 TIAF1O95411 115 aa11.02□□□□□ -0.65
CHMP2A-207ENST00000600804 DLGAP3O95886 979 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms