RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CMTM7Q96FZ5 175 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 IMMP1LQ96LU5 166 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 KCNC2Q96PR1 638 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 SERINC2Q96SA4 455 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 TBCDQ9BTW9 1192 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 TUBB6Q9BUF5 446 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 ZNF160Q9HCG1 818 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 ZBTB26Q9HCK0 441 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 PRDM7Q9NQW5 492 aa15.23■□□□□ 0.03
LSM4-206ENST00000600289 A0A1W2PPM1 405 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 A6NL46 340 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 B3GALT2O43825 422 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 DPM1O60762 260 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 DNAJB6O75190 326 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 SERPINA7P05543 415 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 TUBBP07437 444 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 ICAM2P13598 275 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 TAC1P20366 129 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 MTTPP55157 894 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 HERVK_113P63132 956 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 OLR1P78380 273 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 BTN3A2P78410 334 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 PHEXP78562 749 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 TRAF3Q13114 568 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 MFSD4BQ5TF39 518 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 KHDRBS2Q5VWX1 349 aaKnown RBP15.22■□□□□ 0.03
LSM4-206ENST00000600289 IGFL2Q6UWQ7 119 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 CHSY3Q70JA7 882 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 CPEB2Q7Z5Q1 589 aaKnown RBP15.22■□□□□ 0.03
LSM4-206ENST00000600289 ANKRD37Q7Z713 158 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 KBTBD2Q8IY47 623 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 HUS1BQ8NHY5 278 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 WDR20Q8TBZ3 569 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 ERVK-6Q9BXR3 956 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 NOL11Q9H8H0 719 aaKnown RBP15.22■□□□□ 0.03
LSM4-206ENST00000600289 DMRT3Q9NQL9 472 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 RAB21Q9UL25 225 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 MMACHCQ9Y4U1 282 aa15.22■□□□□ 0.03
LSM4-206ENST00000600289 IGKV3D-11A0A0A0MRZ8 115 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 SYNDIG1LA6NDD5 238 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 GOLGA8RI6L899 631 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 MASP2O00187 686 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 PSMD12O00232 456 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 FOXE1O00358 373 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 PCNAP12004 261 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 KRT15P19012 456 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 ATP5F1P24539 256 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 ITGA3P26006 1051 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 SLCO1A2P46721 670 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 CCNG1P51959 295 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 RAB38P57729 211 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 RUNX2Q13950 521 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 DEPDC1Q5TB30 811 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 IRAK1BP1Q5VVH5 260 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 FAAH2Q6GMR7 532 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 JMJD6Q6NYC1 403 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 LANCL3Q6ZV70 420 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 UBE3DQ7Z6J8 389 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 SLC22A9Q8IVM8 553 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 CYP4X1Q8N118 509 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 TEX19Q8NA77 164 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 MYRIPQ8NFW9 859 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 OR52B6Q8NGF0 335 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 TM9SF4Q92544 642 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 F2RL3Q96RI0 385 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 WDR77Q9BQA1 342 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 RBCK1Q9BYM8 510 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 ROPN1BQ9BZX4 212 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 COPS7BQ9H9Q2 264 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 ROPN1Q9HAT0 212 aaPredicted RBP15.21■□□□□ 0.03
LSM4-206ENST00000600289 LYRM4Q9HD34 91 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 PRDM9Q9NQV7 894 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 MKS1Q9NXB0 559 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 LGALS13Q9UHV8 139 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 EMCNQ9ULC0 261 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 DAPP1Q9UN19 280 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 RNF11Q9Y3C5 154 aa15.21■□□□□ 0.03
LSM4-206ENST00000600289 POLQO75417 2590 aa15.21■□□□□ 0.02
LSM4-206ENST00000600289 TCRBV16S1A1N1A0A5B0 115 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 DLX3O60479 287 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 OTCP00480 354 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 PRR35P0CG20 571 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 PTX3P26022 381 aaPredicted RBP15.2■□□□□ 0.02
LSM4-206ENST00000600289 CRHR1P34998 444 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 PLA2G16P53816 162 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 HSD17B7P56937 341 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 NAA20P61599 178 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 CUL3Q13618 768 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 RCN2Q14257 317 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 ABRAXAS2Q15018 415 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 ZRSR2Q15696 482 aaKnown RBP15.2■□□□□ 0.02
LSM4-206ENST00000600289 CCDC153Q494R4 210 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 ZNF678Q5SXM1 525 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 AGAP7PQ5VUJ5 663 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 PLAG1Q6DJT9 500 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 SCUBE1Q8IWY4 988 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 PARP9Q8IXQ6 854 aa15.2■□□□□ 0.02
LSM4-206ENST00000600289 PSMF1Q92530 271 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms