RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FPR1P21462 350 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 GJA4P35212 333 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TGFBR1P36897 503 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CLK3P49761 638 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 VBP1P61758 197 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 RPP38P78345 283 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CDK6Q00534 326 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CEACAM20Q6UY09 585 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 DEF8Q6ZN54 512 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 EIF3MQ7L2H7 374 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CACTIN-AS1Q8N1I8 211 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 KRT78Q8N1N4 520 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 NLNQ9BYT8 704 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 MARK1Q9P0L2 795 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 EXO1Q9UQ84 846 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CCDC88CQ9P219 2028 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 NADKO95544 446 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 DLGAP3O95886 979 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 MT-ND2P03891 347 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SSR2P43308 183 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 NKX2-5P52952 324 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 ISL1P61371 349 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 MTAPQ13126 283 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SKIV2LQ15477 1246 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 ERICH5Q6P6B1 374 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 BORAQ6PGQ7 559 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SHQ1Q6PI26 577 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLCO6A1Q86UG4 719 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 MEX3DQ86XN8 651 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAM129CQ86XR2 697 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CHCHD4Q8N4Q1 142 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 PROX1Q92786 737 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 APOL4Q9BPW4 351 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 WDR26Q9H7D7 661 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 IMPAD1Q9NX62 359 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TUBA8Q9NY65 449 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF282Q9UDV7 671 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SOX14O95416 240 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 RB1P06400 928 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 RAB8AP61006 207 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 DAB2P98082 770 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 CDK3Q00526 305 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 EPS8Q12929 822 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 RUNX3Q13761 415 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 NCCRP1Q6ZVX7 275 aaPredicted RBP11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC5A8Q8N695 610 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 FLCNQ8NFG4 579 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 DNAJB8Q8NHS0 232 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 HDAC2Q92769 488 aaKnown RBP11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 DACH2Q96NX9 599 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 WDR37Q9Y2I8 494 aa11.02□□□□□ -0.64
ARHGEF1-220ENST00000600274 LOC100506127A0A0U1RQW1 187 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 A6NL46 340 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 LINC01565O15544 149 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 UGDHO60701 494 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 LCKP06239 509 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 HTR1AP08908 422 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 NFATC3Q12968 1075 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 EXOC3L2Q2M3D2 409 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF691Q5VV52 312 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 TRIM40Q6P9F5 258 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 CBLL1Q75N03 491 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 DGLUCYQ7Z3D6 616 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 ETFBKMTQ8IXQ9 262 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 LGI4Q8N135 537 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 AMER3Q8N944 861 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 TMEM145Q8NBT3 493 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 OR10G2Q8NGC3 310 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 COL26A1Q96A83 441 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 PLA2G2FQ9BZM2 168 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 ANKRA2Q9H9E1 313 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 FBXL12Q9NXK8 326 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 STON1Q9Y6Q2 735 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 OBSL1O75147 1896 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 NDUFS2O75306 463 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 HPRP00739 348 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 KELP23276 732 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 HTR1BP28222 390 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 FEN1P39748 380 aaKnown RBP11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 RNF144AP50876 292 aaPredicted RBP11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 BCAP31P51572 246 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 SFSWAPQ12872 951 aaKnown RBP11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 SPCS2Q15005 226 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 MPEG1Q2M385 716 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF750Q32MQ0 723 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF829Q3KNS6 432 aaPredicted RBP11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 RBM48Q5RL73 367 aaKnown RBP11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 XAF1Q6GPH4 301 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 PNCKQ6P2M8 343 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 NRSN1Q8IZ57 195 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 SETD9Q8NE22 299 aa11.02□□□□□ -0.65
ARHGEF1-220ENST00000600274 OR5D16Q8NGK9 328 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms