RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZDHHC11Q9H8X9 412 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 LIN28AQ9H9Z2 209 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 ANKHQ9HCJ1 492 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 UTP6Q9NYH9 597 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 MED16Q9Y2X0 877 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 SONP18583 2426 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 A0A1W2PPR1 153 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 RNF212BA8MTL3 300 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 SMAPO00193 183 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 TP73O15350 636 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 ITGA10O75578 1167 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 SEC31AO94979 1220 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 TTC4O95801 387 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC16A8O95907 504 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 CLCN7P51798 805 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 OLR1P78380 273 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 BBS9Q3SYG4 887 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 HSP90AA5PQ58FG0 334 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 Q5PR19 223 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 C1orf185Q5T7R7 199 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF549Q6P9A3 640 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 IGDCC3Q8IVU1 814 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 PHC2Q8IXK0 858 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 ARMC10Q8N2F6 343 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 ZNF480Q8WV37 535 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 KIAA1191Q96A73 305 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 Q96MF0 132 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 PTCHD1Q96NR3 888 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 KRT12Q99456 494 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC30A3Q99726 388 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 WDR83Q9BRX9 315 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 IARS2Q9NSE4 1012 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 BEX4Q9NWD9 120 aaPredicted RBP12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 TRPS1Q9UHF7 1281 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 FBXO5Q9UKT4 447 aa12.77□□□□□ -0.37
SHKBP1-208ENST00000595726 TRBV11-1A0A0K0K1C0 115 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 OR14I1A6ND48 311 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TRIM64A6NGJ6 449 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TRIM64BA6NI03 449 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 SAGE2PA6NJ88 616 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 E7ENX8 843 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 MYO1CO00159 1063 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 LCMT2O60294 686 aaKnown RBP12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 CCNDBP1O95273 360 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TUBB4AP04350 444 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 FHP07954 510 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 EPXP11678 715 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 MAOAP21397 527 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 BMP5P22003 454 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 MAGEA5P43359 124 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 WNT3P56703 355 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 ETF1P62495 437 aaKnown RBP12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TAP2Q03519 686 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 ACSBG2Q5FVE4 666 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 SPANXN3Q5MJ09 141 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 RIPPLY2Q5TAB7 128 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 THEMIS2Q5TEJ8 643 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 SEM1Q6ZVN7 128 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 SLC26A11Q86WA9 606 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 P3H2Q8IVL5 708 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TMEM251Q8N6I4 163 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 C2CD4AQ8NCU7 369 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 PSD4Q8NDX1 1056 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TBC1D20Q96BZ9 403 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TM4SF19Q96DZ7 209 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 SNF8Q96H20 258 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 NAT9Q9BTE0 207 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 SARGQ9BW04 601 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TRIM31Q9BZY9 425 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 CCDC68Q9H2F9 335 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 TIMMDC1Q9NPL8 285 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 FBXW2Q9UKT8 454 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 ERVK-11Q9UQG0 969 aa12.76□□□□□ -0.37
SHKBP1-208ENST00000595726 KCNE1BA0A087WTH5 132 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 A0A1B0GVC2 190 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ATP6AP2A0A1C7CYW4 349 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 TUBAL3A6NHL2 446 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 EFCAB8A8MWE9 144 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ARHGEF9O43307 516 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CHST10O43529 356 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ATP6AP2O75787 350 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 HAUS5O94927 633 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 IGHG3P01860 377 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CASQ1P31415 396 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ELK3P41970 407 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ABATP80404 500 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 CUL1Q13616 776 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 ARHGAP19Q14CB8 494 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 KLHL38Q2WGJ6 581 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 TTLL9Q3SXZ7 439 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 XKR6Q5GH73 641 aa12.75□□□□□ -0.37
SHKBP1-208ENST00000595726 IL20RBQ6UXL0 311 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms