RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PPP6CO00743 305 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 UGDHO60701 494 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SMIM24O75264 130 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SLU7O95391 586 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ETHE1O95571 254 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 TGFB1P01137 390 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ALPPP05187 535 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 PYGBP11216 843 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 JAK1P23458 1154 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 HSD17B3P37058 310 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SLCO1A2P46721 670 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 PIK3CGP48736 1102 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 MTTPP55157 894 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 LIM2P55344 173 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 DDX39BQ13838 428 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 NSDHLQ15738 373 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 IGFBP7Q16270 282 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 PLEKHN1Q494U1 663 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SFT2D3Q587I9 215 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 KHDRBS2Q5VWX1 349 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 TDRPQ86YL5 185 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 MYLK4Q86YV6 388 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SIRT6Q8N6T7 355 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ACMSDQ8TDX5 336 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ZNF483Q8TF39 744 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 AENQ8WTP8 325 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 PNPLA2Q96AD5 504 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 FAR2Q96K12 515 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SERINC2Q96SA4 455 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 MTERF1Q99551 399 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 NTMT1Q9BV86 223 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SORBS1Q9BX66 1292 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 NPLQ9BXD5 320 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 C1QTNF3Q9BXJ4 246 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ZNF717Q9BY31 904 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 OR51B5Q9H339 312 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ACTR8Q9H981 624 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 DMRT3Q9NQL9 472 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 KCMF1Q9P0J7 381 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 C19orf25Q9UFG5 118 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 ZNF225Q9UK10 706 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 EMCNQ9ULC0 261 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 TMCO1Q9UM00 188 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 DAPP1Q9UN19 280 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SPTBN1Q01082 2364 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 SMIM23A6NLE4 172 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PLPP1O14494 284 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 B3GALT2O43825 422 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 DLX3O60479 287 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 KLHL41O60662 606 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PRMT3O60678 531 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 SCELO95171 688 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 CLDN9O95484 217 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 TSPAN8P19075 237 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 ATP5A1P25705 553 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 SERPINB1P30740 379 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PIK3CBP42338 1070 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 NEK2P51955 445 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 RAB38P57729 211 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 RPS13P62277 151 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 FOXK1P85037 733 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 MFAP5Q13361 173 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 RASA2Q15283 850 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 ZRSR2Q15696 482 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 CPSF6Q16630 551 aaKnown RBP eCLIP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 TMEM35AQ53FP2 167 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 CRB2Q5IJ48 1285 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 DEPDC1Q5TB30 811 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 B3GNTL1Q67FW5 361 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PLAG1Q6DJT9 500 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 WDR93Q6P2C0 686 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PAPD4Q6PIY7 484 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 ISLR2Q6UXK2 745 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 LINC00696Q6ZRV3 163 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 Q6ZS92 163 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 CUZD1Q86UP6 607 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 LCA5Q86VQ0 697 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 ACOT4Q8N9L9 421 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 FAM47BQ8NA70 645 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 OR2W6PQ8NHA6 318 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PPP4R1Q8TF05 950 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 MIB2Q96AX9 1013 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 CMTM7Q96FZ5 175 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PTCHD1Q96NR3 888 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 KCNC2Q96PR1 638 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 TMEM237Q96Q45 408 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 CCDC77Q9BR77 488 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 TBCDQ9BTW9 1192 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 SEMA4BQ9NPR2 832 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PRDM9Q9NQV7 894 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PTGFRNQ9P2B2 879 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PLAAQ9Y263 795 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 B3GNT3Q9Y2A9 372 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 PCDHGA11Q9Y5H2 935 aa10.31□□□□□ -0.76
SHKBP1-206ENST00000595523 A0A088AWK7 358 aa10.3□□□□□ -0.76
SHKBP1-206ENST00000595523 PSMD12O00232 456 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-206ENST00000595523 WISP1O95388 367 aa10.3□□□□□ -0.76
SHKBP1-206ENST00000595523 GSTA1P08263 222 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms