RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 AP2A2O94973 939 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 ESRRBO95718 433 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CD63P08962 238 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 MPC1LP0DKB6 136 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 AGAP20933 346 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CDH3P22223 829 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CDH13P55290 713 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 PKNOX1P55347 436 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 ADORA2A-AS1P86434 159 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 SQLEQ14534 574 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CDSNQ15517 529 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 IRAK1BP1Q5VVH5 260 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 PGM2L1Q6PCE3 622 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 TTC23LQ6PF05 361 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 RNF165Q6ZSG1 346 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 NET1Q7Z628 596 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-202ENST00000595242 TRAPPC5Q8IUR0 188 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 TMEM151BQ8IW70 566 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CLDN19Q8N6F1 224 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 DDHD1Q8NEL9 900 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 OR1N1Q8NGS0 311 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
SCAF1-202ENST00000595242 NSUN5Q96P11 429 aaKnown RBP12.19□□□□□ -0.46
SCAF1-202ENST00000595242 TAAR6Q96RI8 345 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 ZNF382Q96SR6 550 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 SPOCK3Q9BQ16 436 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 MID1IP1Q9NPA3 183 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 IMP3Q9NV31 184 aaKnown RBP12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CD274Q9NZQ7 290 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 NDOR1Q9UHB4 597 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 DNAJC15Q9Y5T4 150 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 CFAP20Q9Y6A4 193 aaKnown RBP12.19□□□□□ -0.46
SCAF1-202ENST00000595242 VPS13CQ709C8 3753 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 FLNAP21333 2647 aaKnown RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 QSOX1O00391 747 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 KCNJ13O60928 360 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 UMODP07911 640 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 ENO2P09104 434 aaPredicted RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 OR56A5P0C7T3 313 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 PRR35P0CG20 571 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 MTHFD1P11586 935 aaKnown RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 ITGAXP20702 1163 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 CDKL1Q00532 357 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 MAPRE2Q15555 327 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 XKR7Q5GH72 579 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 C1orf189Q5VU69 101 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 TMEM198Q66K66 360 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 NXNQ6DKJ4 435 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 OGFOD2Q6N063 350 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 NEK10Q6ZWH5 1172 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 AMZ2Q86W34 360 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 SCUBE1Q8IWY4 988 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 ULK2Q8IYT8 1036 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 POU5F2Q8N7G0 328 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 TRPC4APQ8TEL6 797 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 TWIST2Q8WVJ9 160 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 CCT7Q99832 543 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 RNPEPL1Q9HAU8 725 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 SEMA3GQ9NS98 782 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 IFT80Q9P2H3 777 aaPredicted RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 FBXL4Q9UKA2 621 aa12.18□□□□□ -0.46
SCAF1-202ENST00000595242 PTBP2Q9UKA9 531 aaKnown RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 PRPF19Q9UMS4 504 aaKnown RBP12.18□□□□□ -0.46
SCAF1-202ENST00000595242 A0A088AWK7 358 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 KPNA5O15131 536 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 UBDO15205 165 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 MAP3K7O43318 606 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 CNOT3O75175 753 aaKnown RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 CLDN14O95500 239 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 UROSP10746 265 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 EZRP15311 586 aaKnown RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 POLR2CP19387 275 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 AOAHP28039 575 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 SMSP52788 366 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 MXRA7P84157 204 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 TMEM115Q12893 351 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 SP140Q13342 867 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 CYLC2Q14093 348 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 SLC9A5Q14940 896 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 ACSBG2Q5FVE4 666 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 CLEC6AQ6EIG7 209 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 FAM83HQ6ZRV2 1179 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 FRA10AC1Q70Z53 315 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 GPR135Q8IZ08 494 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 HMGCLL1Q8TB92 370 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 GSX1Q9H4S2 264 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-202ENST00000595242 SLC7A8Q9UHI5 535 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 ZNF225Q9UK10 706 aa12.17□□□□□ -0.46
SCAF1-202ENST00000595242 POMT2Q9UKY4 750 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms