RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MS4A6EQ96DS6 147 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 OSBPL9Q96SU4 736 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 EGFL8Q99944 293 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 DDX47Q9H0S4 455 aaKnown RBP15.22■□□□□ 0.03
LIG1-205ENST00000593425 DEFB127Q9H1M4 99 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 TP63Q9H3D4 680 aaPredicted RBP15.22■□□□□ 0.03
LIG1-205ENST00000593425 LIN28AQ9H9Z2 209 aaKnown RBP15.22■□□□□ 0.03
LIG1-205ENST00000593425 TIMMDC1Q9NPL8 285 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 PSAT1Q9Y617 370 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 MED13LQ71F56 2210 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 PHF3Q92576 2039 aaKnown RBP15.22■□□□□ 0.03
LIG1-205ENST00000593425 A0A0G2JMM0 328 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 GOLGA6L10A0A0M3HER8 536 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 A0A1W2PPB8 328 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 A0A1W2PRS3 328 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 KIR3DP1A8MWS1 328 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 FANCGO15287 622 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 ERI3O43414 337 aaKnown RBP15.21■□□□□ 0.03
LIG1-205ENST00000593425 TUBB4AP04350 444 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 IVDP26440 423 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 GDF5P43026 501 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 SSR4P51571 173 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 RAB38P57729 211 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 STXBP1P61764 594 aaKnown RBP15.21■□□□□ 0.03
LIG1-205ENST00000593425 XKR6Q5GH73 641 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 TMEM211Q6ICI0 200 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 ARHGAP11AQ6P4F7 1023 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 CLNKQ7Z7G1 428 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 CCDC71Q8IV32 467 aaPredicted RBP15.21■□□□□ 0.03
LIG1-205ENST00000593425 FAM47BQ8NA70 645 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 SREK1Q8WXA9 508 aaKnown RBP15.21■□□□□ 0.03
LIG1-205ENST00000593425 FAR2Q96K12 515 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 QRFPRQ96P65 431 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 CSF3RQ99062 836 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 ERVK-11Q9UQG0 969 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 OARD1Q9Y530 152 aa15.21■□□□□ 0.03
LIG1-205ENST00000593425 HIVEP1P15822 2718 aa15.21■□□□□ 0.02
LIG1-205ENST00000593425 C2CD3Q4AC94 2353 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 EML6Q6ZMW3 1958 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 OR2J2O76002 312 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 KRT38O76015 456 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 TOXO94900 526 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 WDR47O94967 919 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 TBX6O95947 436 aaPredicted RBP15.2■□□□□ 0.02
LIG1-205ENST00000593425 C1GALT1C1LP0DN25 315 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 CHRNB4P30926 498 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 SLC6A12P48065 614 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 HSD17B7P56937 341 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 CDKL1Q00532 357 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 SLC13A2Q13183 592 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 SLBPQ14493 270 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIG1-205ENST00000593425 STEAP4Q687X5 459 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 ADNP2Q6IQ32 1131 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 SLCO4C1Q6ZQN7 724 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 KLHDC8AQ8IYD2 350 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 LILRB4Q8NHJ6 448 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 ANKRD49Q8WVL7 239 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 CCT6BQ92526 530 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 RND1Q92730 232 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 CCDC77Q9BR77 488 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 NPLQ9BXD5 320 aaPredicted RBP15.2■□□□□ 0.02
LIG1-205ENST00000593425 ADAP2Q9NPF8 381 aa15.2■□□□□ 0.02
LIG1-205ENST00000593425 YARS2Q9Y2Z4 477 aaKnown RBP15.2■□□□□ 0.02
LIG1-205ENST00000593425 CCDC168Q8NDH2 2452 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 TACC2O95359 2948 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 MYOCOSA0A1B0GUC4 107 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 FAM95CA0A1B0GW59 222 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 LRIT2A6NDA9 550 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 USP27XA6NNY8 438 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 FAM166BA8MTA8 275 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 A8MVJ9 347 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 G3V3Y1 287 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 ZFAND5O76080 213 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 OR6B1O95007 311 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 GNAZP19086 355 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 CERS1P27544 350 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 MSX1P28360 303 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 SOX3P41225 446 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 PLA2G16P53816 162 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 NUP107P57740 925 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 TAS2R39P59534 338 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 PPIAP62937 165 aaKnown RBP15.19■□□□□ 0.02
LIG1-205ENST00000593425 TSNQ15631 228 aaKnown RBP15.19■□□□□ 0.02
LIG1-205ENST00000593425 IL20RBQ6UXL0 311 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 TMIGD1Q6UXZ0 262 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 VN1R5Q7Z5H4 357 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 ZC3HC1Q86WB0 502 aaKnown RBP15.19■□□□□ 0.02
LIG1-205ENST00000593425 DMRTC2Q8IXT2 367 aaPredicted RBP15.19■□□□□ 0.02
LIG1-205ENST00000593425 NKAPQ8N5F7 415 aaKnown RBP15.19■□□□□ 0.02
LIG1-205ENST00000593425 OR2M7Q8NG81 312 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 ANKRD7Q92527 254 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 RHBDF1Q96CC6 855 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 RASL10BQ96S79 203 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 PNPLA3Q9NST1 481 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 HPF1Q9NWY4 346 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 TNFRSF10DQ9UBN6 386 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 LIPGQ9Y5X9 500 aa15.19■□□□□ 0.02
LIG1-205ENST00000593425 TEX264Q9Y6I9 313 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms