RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SYVN1Q86TM6 617 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 OFCC1Q8IZS5 231 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 C1orf52Q8N6N3 182 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PNLDC1Q8NA58 520 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PIWIL2Q8TC59 973 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 TWIST2Q8WVJ9 160 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PYCR2Q96C36 320 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 NXNL1Q96CM4 212 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 C19orf60Q96EN9 201 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 ALOXE3Q9BYJ1 711 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 GABRR3A8MPY1 467 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PRR23D1E9PI22 279 aaPredicted RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 SURF4O15260 269 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 GALR3O60755 368 aaPredicted RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PPM1BO75688 479 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 OR4F21O95013 312 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 TGDSO95455 350 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CSTAP01040 98 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 RPSAP08865 295 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PRR23D2P0DMB1 279 aaPredicted RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CLUP10909 449 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 HMGA1P17096 107 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CPOXP36551 454 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CLDN10P78369 228 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 SLAMF1Q13291 335 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 NLRP14Q86W24 1093 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PROSER1Q86XN7 944 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 MISPQ8IVT2 679 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CARFQ8N187 725 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 BCORP1Q8N888 145 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 NOA1Q8NC60 698 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 PAPD5Q8NDF8 572 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 GSTCDQ8NEC7 633 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 TSPAN14Q8NG11 270 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 LRRN4Q8WUT4 740 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 RNF31Q96EP0 1072 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 TRIM2Q9C040 744 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CNTN6Q9UQ52 1028 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 MYH3P11055 1940 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 UQCRC1P31930 480 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 MDH1P40925 334 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 TRMT5Q32P41 509 aaKnown RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 KLHL12Q53G59 568 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 OR52E4Q8NGH9 312 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 CA5BP1Q8WTZ4 195 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 LINC01599Q8WXQ3 324 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 NPLQ9BXD5 320 aaPredicted RBP10.94□□□□□ -0.66
SEH1L-208ENST00000590843 MCM8Q9UJA3 840 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 WDR45Q9Y484 360 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 ABCA3Q99758 1704 aa10.94□□□□□ -0.66
SEH1L-208ENST00000590843 NPHS1O60500 1241 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 SLITRK5O94991 958 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CHRM5P08912 532 aaPredicted RBP10.93□□□□□ -0.66
SEH1L-208ENST00000590843 IL1RNP18510 177 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CCNOP22674 350 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 DCDC1P59894 354 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 ZNF763Q0D2J5 394 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 STK11Q15831 433 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 DHDDSQ86SQ9 333 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 OR11L1Q8NGX0 322 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 OR2L8Q8NGY9 312 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 BOD1Q96IK1 185 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CCDC74BQ96LY2 380 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 AGAP2Q99490 1192 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 NANOGQ9H9S0 305 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 A0A1W2PPW3 197 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 LILRA5A6NI73 299 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 LSM1O15116 133 aaKnown RBP10.93□□□□□ -0.66
SEH1L-208ENST00000590843 MAFKO60675 156 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 PIAS2O75928 621 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CEACAM1P13688 526 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 OR4C11Q6IEV9 310 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CD244Q9BZW8 370 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 SOX17Q9H6I2 414 aaPredicted RBP10.93□□□□□ -0.66
SEH1L-208ENST00000590843 FKRPQ9H9S5 495 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CHMP1AQ9HD42 196 aaPredicted RBP10.93□□□□□ -0.66
SEH1L-208ENST00000590843 CA5BQ9Y2D0 317 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 PCDHGA1Q9Y5H4 931 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 hCG_1809904A0A1W2PP81 198 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 A0A1W2PPE2 198 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 A0A1W2PR64 198 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 A0A1W2PRV1 198 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 STX16-NPEPL1H3BU86 382 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 STX16O14662 325 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 YY2O15391 372 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 ALOX12BO75342 701 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 TSPAN19P0C672 248 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 SLC6A4P31645 630 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 NKAIN1Q4KMZ8 207 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 XKR5Q6UX68 686 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 GALNT6Q8NCL4 622 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 SLC19A3Q9BZV2 496 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 MAGEL2Q9UJ55 1249 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 SPAARA0A1B0GVQ0 90 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 TRBC2A0A5B9 178 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 HRGP04196 525 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 EPHA5P54756 1037 aa10.93□□□□□ -0.66
SEH1L-208ENST00000590843 RPS13P62277 151 aaKnown RBP10.93□□□□□ -0.66
SEH1L-208ENST00000590843 MERTKQ12866 999 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms