RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 NDUFAF6Q330K2 333 aa16.46■□□□□ 0.23
SMARCA4-215ENST00000590574 IER5LQ5T953 404 aa16.46■□□□□ 0.23
SMARCA4-215ENST00000590574 RNF175Q8N4F7 328 aa16.46■□□□□ 0.23
SMARCA4-215ENST00000590574 IRF7Q92985 503 aa16.46■□□□□ 0.23
SMARCA4-215ENST00000590574 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
SMARCA4-215ENST00000590574 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.23
SMARCA4-215ENST00000590574 E2F2Q14209 437 aa16.46■□□□□ 0.22
SMARCA4-215ENST00000590574 MAD2L1BPQ15013 274 aaPredicted RBP16.46■□□□□ 0.22
SMARCA4-215ENST00000590574 KLHL36Q8N4N3 616 aa16.46■□□□□ 0.22
SMARCA4-215ENST00000590574 OR14C36Q8NHC7 312 aa16.46■□□□□ 0.22
SMARCA4-215ENST00000590574 RIIAD1A6NNX1 92 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CCR7P32248 378 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CRISP1P54107 249 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 STXBP1P61764 594 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 C6orf183Q5T699 404 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 AFMIDQ63HM1 303 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 KIAA1324Q6UXG2 1013 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 RANBP3LQ86VV4 465 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 SNX29P2Q8IUI4 249 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 PEX5LQ8IYB4 626 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CBARPQ8N350 705 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CHST14Q8NCH0 376 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CLIP3Q96DZ5 547 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CAMK1GQ96NX5 476 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 OR51V1Q9H2C8 321 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 RMI1Q9H9A7 625 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 TMEM27Q9HBJ8 222 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 NKIRAS2Q9NYR9 191 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 FAM170BA6NMN3 283 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CLCA1A8K7I4 914 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 AXIN1O15169 862 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 DNTTP04053 509 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 HTR1BP28222 390 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 POLR2IP36954 125 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CAPZA2P47755 286 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 HK3P52790 923 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CSTF1Q05048 431 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 ZNF805Q5CZA5 627 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CPZQ66K79 652 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 MARCH9Q86YJ5 346 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 SORCS1Q8WY21 1168 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 ZNF385DQ9H6B1 395 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 SYNDIG1Q9H7V2 258 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 COLEC10Q9Y6Z7 277 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 A8MV72 311 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 TTC34A8MYJ7 566 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 HLA-DQA2P01906 255 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 HLA-EP13747 358 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 MPIP34949 423 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 CD83Q01151 205 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 METTL2BQ6P1Q9 378 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 LRRTM4Q86VH4 590 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 BPIFB1Q8TDL5 484 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 ANKRD31Q8N7Z5 1873 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 ORC5O43913 435 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 STAT5AP42229 794 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 LIPKQ5VXJ0 399 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 FIBINQ8TAL6 211 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 LCN9Q8WX39 176 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 MUL1Q969V5 352 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 P2RY13Q9BPV8 354 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 MCUBQ9NWR8 336 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 SEC14L4Q9UDX3 406 aa16.45■□□□□ 0.22
SMARCA4-215ENST00000590574 EIF3FO00303 357 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 ADAM12O43184 909 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 JRKO75564 520 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 RAB36O95755 333 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 CTSOP43234 321 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 LGALS3BPQ08380 585 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 HNRNPA0Q13151 305 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 XKR7Q5GH72 579 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 IRAK1BP1Q5VVH5 260 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 CPA6Q8N4T0 437 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SMPDL3AQ92484 453 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 DUS3LQ96G46 650 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 MED28Q9H204 178 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SMURF1Q9HCE7 757 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 STOX2Q9P2F5 926 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 ARHGEF33A8MVX0 844 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SLC16A8O95907 504 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 C8orf89P0DMQ9 161 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SUOXP51687 545 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 ATP12AP54707 1039 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 FCHO2Q0JRZ9 810 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 GRHL2Q6ISB3 625 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 OR9Q2Q8NGE9 314 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 CCDC115Q96NT0 180 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 UHRF1Q96T88 793 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 ELOVL2Q9NXB9 296 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 GLOD5A6NK44 160 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 NDUFS4O43181 175 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 RHCEP18577 417 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 CSNK2A2P19784 350 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SBSNQ6UWP8 590 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 IL17FQ96PD4 163 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 ERVK13-1Q9NX77 482 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 KIAA1217Q5T5P2 1943 aa16.44■□□□□ 0.22
SMARCA4-215ENST00000590574 SMN1Q16637 294 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms