RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PRDM9Q9NQV7 894 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 PRDM7Q9NQW5 492 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 PRTFDC1Q9NRG1 225 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
TPM4-212ENST00000590180 TENM4Q6N022 2769 aa11.35□□□□□ -0.59
TPM4-212ENST00000590180 SVILO95425 2214 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 TCP11X1B4DZS4 312 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 SAP18O00422 153 aaKnown RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 KLK8O60259 260 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 WDPCPO95876 746 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 TBX6O95947 436 aaPredicted RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 MYBL2P10244 700 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 CERS1P27544 350 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 MAGEA12P43365 314 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 PIK3CGP48736 1102 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 RAB38P57729 211 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 TAS2R50P59544 299 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 PCDH1Q08174 1060 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 RCN2Q14257 317 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 CPSF6Q16630 551 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM4-212ENST00000590180 ADPRMQ3LIE5 342 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 TMEM35AQ53FP2 167 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 LIPJQ5W064 366 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 GRHL2Q6ISB3 625 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 ADGRD1Q6QNK2 874 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 QSOX2Q6ZRP7 698 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 GOLGA7Q7Z5G4 137 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 GSPT2Q8IYD1 628 aaKnown RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 LAS2Q8IYD9 372 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 ISL2Q96A47 359 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 MRPL57Q9BQC6 102 aaKnown RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 TBCDQ9BTW9 1192 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 ROGDIQ9GZN7 287 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 OR51B5Q9H339 312 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 MMP25Q9NPA2 562 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 PNO1Q9NRX1 252 aaKnown RBP11.34□□□□□ -0.59
TPM4-212ENST00000590180 AGPAT4Q9NRZ5 378 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 XPR1Q9UBH6 696 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 ADGRE2Q9UHX3 823 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 TMCO1Q9UM00 188 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 MMACHCQ9Y4U1 282 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 PCDHGA11Q9Y5H2 935 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 PCDHGA10Q9Y5H3 936 aa11.34□□□□□ -0.59
TPM4-212ENST00000590180 TRAV17A0A0B4J275 112 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 IQANK1A0A1B0GTG1 560 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 RTCAO00442 366 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 ATP5A1P25705 553 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 SERPINB1P30740 379 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 TSFMP43897 325 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 ST13P50502 369 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 TNFSF10P50591 281 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 RAP1GDS1P52306 607 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 LIM2P55344 173 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 SLC26A5P58743 744 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 PHEXP78562 749 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 UBAP2LQ14157 1087 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 E2F2Q14209 437 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 MEP1AQ16819 746 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 DEPDC1Q5TB30 811 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 TIFABQ6ZNK6 161 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 UBE3DQ7Z6J8 389 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 CLNKQ7Z7G1 428 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 ZNF595Q8IYB9 648 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 RNF175Q8N4F7 328 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 ACOT4Q8N9L9 421 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 FAM47BQ8NA70 645 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 ADAMTS18Q8TE60 1221 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 RGMAQ96B86 450 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 REPS1Q96D71 796 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 MTFMTQ96DP5 389 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 MTBPQ96DY7 904 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 KCNC2Q96PR1 638 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 MTERF1Q99551 399 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 MS4A8Q9BY19 250 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 MRPL46Q9H2W6 279 aaKnown RBP11.33□□□□□ -0.6
TPM4-212ENST00000590180 CDCP1Q9H5V8 836 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 ABI3Q9P2A4 366 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 DAPP1Q9UN19 280 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 RNF11Q9Y3C5 154 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 SPACA6W5XKT8 324 aa11.33□□□□□ -0.6
TPM4-212ENST00000590180 FLNCQ14315 2725 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 NUP210LQ5VU65 1888 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 MYOCOSA0A1B0GUC4 107 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 TCRBV16S1A1N1A0A5B0 115 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 GOLGA8RI6L899 631 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 E2F3O00716 465 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 CTNSO60931 367 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 CLDN9O95484 217 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 IFNA16P05015 189 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 TNNI3P19429 210 aa11.32□□□□□ -0.6
TPM4-212ENST00000590180 PTX3P26022 381 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms