RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 Q6ZPB1 254 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-206ENST00000587730 PTCHD4Q6ZW05 846 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 RNF130Q86XS8 419 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SYTL1Q8IYJ3 562 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 TAGAPQ8N103 731 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SLC30A2Q9BRI3 323 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 ITM2CQ9NQX7 267 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 TMEM184CQ9NVA4 438 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 EHD3Q9NZN3 535 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 FTSJ1Q9UET6 329 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 KLHL3Q9UH77 587 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 CD84Q9UIB8 345 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 KCND3Q9UK17 655 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 UPK3BL1B0FP48 263 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 UPK3BL2E5RIL1 263 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 C6orf47O95873 294 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 ZNF8P17098 575 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-206ENST00000587730 ENDOUP21128 410 aaKnown RBP17.79■□□□□ 0.44
DDX39A-206ENST00000587730 HLA-FP30511 346 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SEPHS1P49903 392 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SMIM11AP58511 58 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SPOUT1Q5T280 376 aaKnown RBP17.79■□□□□ 0.44
DDX39A-206ENST00000587730 ZNF544Q6NX49 715 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 COMMD6Q7Z4G1 85 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 NRSN1Q8IZ57 195 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 GPR156Q8NFN8 814 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 LRIG1Q96JA1 1093 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 AMBNQ9NP70 447 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 DMRT3Q9NQL9 472 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 RLIMQ9NVW2 624 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 GPATCH2Q9NW75 528 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 SPG21Q9NZD8 308 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 NDOR1Q9UHB4 597 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 TMCC3Q9ULS5 477 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 ICKQ9UPZ9 632 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 ZNF451Q9Y4E5 1061 aa17.79■□□□□ 0.44
DDX39A-206ENST00000587730 TSPAN6O43657 245 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 KIAA0513O60268 411 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 PDE9AO76083 593 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 KCNK2O95069 426 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 SCG5P05408 212 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 C1GALT1C1LP0DN25 315 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 UQCRC2P22695 453 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 CASP3P42574 277 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 SLC15A1P46059 708 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 NUDT6P53370 316 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 TCTN1Q2MV58 587 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 COX20Q5RI15 118 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 TMEM201Q5SNT2 666 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 FRMPD2BQ6IN97 320 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 FAM71E1Q6IPT2 247 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 CCBE1Q6UXH8 406 aaPredicted RBP17.78■□□□□ 0.44
DDX39A-206ENST00000587730 HSD11B1LQ7Z5J1 315 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 DDX53Q86TM3 631 aaKnown RBP17.78■□□□□ 0.44
DDX39A-206ENST00000587730 CMTM8Q8IZV2 173 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 OR52J3Q8NH60 311 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 GLYATL1Q969I3 302 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 CORO1BQ9BR76 489 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 CENPOQ9BU64 300 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 TAPBPLQ9BX59 468 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 ZCCHC2Q9C0B9 1178 aaKnown RBP17.78■□□□□ 0.44
DDX39A-206ENST00000587730 HMX1Q9NP08 348 aaPredicted RBP17.78■□□□□ 0.44
DDX39A-206ENST00000587730 SEC14L4Q9UDX3 406 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 MGAT4BQ9UQ53 548 aa17.78■□□□□ 0.44
DDX39A-206ENST00000587730 EXO1Q9UQ84 846 aaKnown RBP17.78■□□□□ 0.44
DDX39A-206ENST00000587730 CFAP20Q9Y6A4 193 aaKnown RBP17.78■□□□□ 0.44
DDX39A-206ENST00000587730 OR2AG2A6NM03 316 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 LEFTY2O00292 366 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 SLITRK5O94991 958 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 OPN1SWP03999 348 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 KRT8P05787 483 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 HSMCR30P0CW71 290 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 CSTF2P33240 577 aaKnown RBP eCLIP17.77■□□□□ 0.44
DDX39A-206ENST00000587730 MED22Q15528 200 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 LRIT3Q3SXY7 679 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 ZNF385BQ569K4 471 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 AGAP6Q5VW22 663 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 DESI1Q6ICB0 168 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 REEP3Q6NUK4 255 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 DPPA4Q7L190 304 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 TMPRSS11BQ86T26 416 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 AQP11Q8NBQ7 271 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 OR9Q1Q8NGQ5 310 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 C16orf78Q8WTQ4 265 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 RASSF5Q8WWW0 418 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 NEIL2Q969S2 332 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 AGAP4Q96P64 663 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 TEFMQ96QE5 360 aaKnown RBP17.77■□□□□ 0.44
DDX39A-206ENST00000587730 RIOK2Q9BVS4 552 aaKnown RBP17.77■□□□□ 0.44
DDX39A-206ENST00000587730 SGPP1Q9BX95 441 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 NLNQ9BYT8 704 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 HOXD1Q9GZZ0 328 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 RC3H2Q9HBD1 1191 aaKnown RBP17.77■□□□□ 0.44
DDX39A-206ENST00000587730 FZD3Q9NPG1 666 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 AHSPQ9NZD4 102 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 SPATA7Q9P0W8 599 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 DKK3Q9UBP4 350 aa17.77■□□□□ 0.44
DDX39A-206ENST00000587730 DSPPQ9NZW4 1301 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms