RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 CYR61O00622 381 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 NRDCO43847 1150 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 OR2J2O76002 312 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 TUBB4AP04350 444 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 C1GALT1C1LP0DN25 315 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 PPP2R1BP30154 601 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
SDF2-202ENST00000585428 CDKL1Q00532 357 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 PAOXQ6QHF9 649 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 SLCO4C1Q6ZQN7 724 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 RGS9BPQ6ZS82 235 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 CCDC71Q8IV32 467 aaPredicted RBP13.45□□□□□ -0.26
SDF2-202ENST00000585428 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 GPALPP1Q8IXQ4 340 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 GPATCH11Q8N954 259 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 PSD4Q8NDX1 1056 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 TMEM52Q8NDY8 209 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 NCLNQ969V3 563 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 MS4A6EQ96DS6 147 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 QRFPRQ96P65 431 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 NAP1L3Q99457 506 aaPredicted RBP13.45□□□□□ -0.26
SDF2-202ENST00000585428 LIN28AQ9H9Z2 209 aaKnown RBP13.45□□□□□ -0.26
SDF2-202ENST00000585428 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 MYOTQ9UBF9 498 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 KCNN3Q9UGI6 736 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
SDF2-202ENST00000585428 A0A1B0GVC2 190 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 CDC7O00311 574 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 CLDN4O14493 209 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 GLSO94925 669 aaPredicted RBP13.44□□□□□ -0.26
SDF2-202ENST00000585428 TBX6O95947 436 aaPredicted RBP13.44□□□□□ -0.26
SDF2-202ENST00000585428 CNR1P21554 472 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 IVDP26440 423 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 HNRNPH1P31943 449 aaKnown RBP13.44□□□□□ -0.26
SDF2-202ENST00000585428 FNTAP49354 379 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 HNRNPFP52597 415 aaKnown RBP13.44□□□□□ -0.26
SDF2-202ENST00000585428 NUP107P57740 925 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 STXBP1P61764 594 aaKnown RBP13.44□□□□□ -0.26
SDF2-202ENST00000585428 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 IL20RBQ6UXL0 311 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 ACAD11Q709F0 780 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 TMPRSS11BQ86T26 416 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 ZNF595Q8IYB9 648 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 OR2M7Q8NG81 312 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 FAM45AQ8TCE6 357 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 ACTRT1Q8TDG2 376 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 GAL3ST3Q96A11 431 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 SEC16BQ96JE7 1060 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 FAR2Q96K12 515 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 NT5DC2Q9H857 520 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 PRTFDC1Q9NRG1 225 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 ERVK-11Q9UQG0 969 aa13.44□□□□□ -0.26
SDF2-202ENST00000585428 OR14I1A6ND48 311 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 A8MVJ9 347 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 NPIPA2E9PIF3 369 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 NPIPA3F8WFD2 350 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
SDF2-202ENST00000585428 KLK8O60259 260 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 H2AFYO75367 372 aaKnown RBP13.43□□□□□ -0.26
SDF2-202ENST00000585428 OR6B1O95007 311 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 IGHG3P01860 377 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 GNAZP19086 355 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 GDF5P43026 501 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 HNMTP50135 292 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 RAB38P57729 211 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 ADPRMQ3LIE5 342 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 CES4AQ5XG92 561 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 TRMT10BQ6PF06 316 aaKnown RBP13.43□□□□□ -0.26
SDF2-202ENST00000585428 TMIGD1Q6UXZ0 262 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 TMEM132CQ8N3T6 1108 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 TTLQ8NG68 377 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 PTPMT1Q8WUK0 201 aaPredicted RBP13.43□□□□□ -0.26
SDF2-202ENST00000585428 RASL10BQ96S79 203 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 CCDC77Q9BR77 488 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 ZNF559Q9BR84 538 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 TTYH2Q9BSA4 534 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 ADAP2Q9NPF8 381 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
SDF2-202ENST00000585428 PNPLA3Q9NST1 481 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 HPF1Q9NWY4 346 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 VTI1BQ9UEU0 232 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 PPP2R2CQ9Y2T4 447 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 CACNA1CQ13936 2221 aa13.43□□□□□ -0.26
SDF2-202ENST00000585428 MED13LQ71F56 2210 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 A0A0G2JN53 185 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 FAM90A27PA6NNH2 459 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 PGRMC1O00264 195 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 ERI3O43414 337 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 CTNSO60931 367 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 ZNF37AP17032 561 aaPredicted RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 GSTM2P28161 218 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 DNAJA1P31689 397 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 ELK3P41970 407 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 SLC6A12P48065 614 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 ART1P52961 327 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms