RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 HSF1Q00613 529 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 MGAT5Q09328 741 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 RUNX2Q13950 521 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 RCN2Q14257 317 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 CDKL4Q5MAI5 379 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 ARHGAP11AQ6P4F7 1023 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 TRMT10BQ6PF06 316 aaKnown RBP13.99□□□□□ -0.17
VAPA-209ENST00000585042 RGS9BPQ6ZS82 235 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 ZC3HC1Q86WB0 502 aaKnown RBP13.99□□□□□ -0.17
VAPA-209ENST00000585042 TMEM132CQ8N3T6 1108 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 CHTF18Q8WVB6 975 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 SDCCAG3Q96C92 435 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 MS4A6EQ96DS6 147 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 EGFL8Q99944 293 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 DDX47Q9H0S4 455 aaKnown RBP13.99□□□□□ -0.17
VAPA-209ENST00000585042 RHBGQ9H310 441 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 EHD1Q9H4M9 534 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 MCCC2Q9HCC0 563 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 MOCS1Q9NZB8 636 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 GPRC5BQ9NZH0 403 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 CTNNAL1Q9UBT7 734 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 FBXW2Q9UKT8 454 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 IKZF3Q9UKT9 509 aa13.99□□□□□ -0.17
VAPA-209ENST00000585042 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 ANKDD1BA6NHY2 528 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 A8MUA0 341 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 FOXO6A8MYZ6 492 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CDC7O00311 574 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 B3GALT2O43825 422 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 TUBB4AP04350 444 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 GGT5P36269 586 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 SLC6A12P48065 614 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 SSR4P51571 173 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 PGGT1BP53609 377 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 ARL4CP56559 192 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 RAB38P57729 211 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 EFTUD2Q15029 972 aaKnown RBP eCLIP13.98□□□□□ -0.173e-9■■■■□ 26.5
VAPA-209ENST00000585042 ADPRMQ3LIE5 342 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CMPK2Q5EBM0 449 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 TCAIMQ8N3R3 496 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 OR2L5Q8NG80 312 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 LILRB4Q8NHJ6 448 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 RHBDF1Q96CC6 855 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CFAP36Q96G28 342 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CAPZA3Q96KX2 299 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 AICDAQ9GZX7 198 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 TP63Q9H3D4 680 aaPredicted RBP13.98□□□□□ -0.17
VAPA-209ENST00000585042 ADAP2Q9NPF8 381 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 PRTFDC1Q9NRG1 225 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 PNO1Q9NRX1 252 aaKnown RBP13.98□□□□□ -0.17
VAPA-209ENST00000585042 SLC17A6Q9P2U8 582 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CHMP2BQ9UQN3 213 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 CLDN16Q9Y5I7 305 aa13.98□□□□□ -0.17
VAPA-209ENST00000585042 FAM95CA0A1B0GW59 222 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 C4orf51C9J302 202 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 HS6ST1O60243 411 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 CTNSO60931 367 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 WDR47O94967 919 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 TPOP07202 933 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 CHRNB4P30926 498 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 CASQ1P31415 396 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 TAS2R39P59534 338 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 SLC13A2Q13183 592 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 ELAVL1Q15717 326 aaKnown RBP13.97□□□□□ -0.17
VAPA-209ENST00000585042 SPNS3Q6ZMD2 512 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 MEX3BQ6ZN04 569 aaKnown RBP13.97□□□□□ -0.17
VAPA-209ENST00000585042 FRA10AC1Q70Z53 315 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 MDGA2Q7Z553 956 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.97□□□□□ -0.173e-9■■■■■ 57.3
VAPA-209ENST00000585042 MORN4Q8NDC4 146 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 OR8K3Q8NH51 312 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 RND1Q92730 232 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 DAZLQ92904 295 aaKnown RBP13.97□□□□□ -0.17
VAPA-209ENST00000585042 NCLNQ969V3 563 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 KIAA1191Q96A73 305 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 QRFPRQ96P65 431 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 SERINC2Q96SA4 455 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 CNOT10Q9H9A5 744 aaKnown RBP13.97□□□□□ -0.17
VAPA-209ENST00000585042 SLC24A3Q9HC58 644 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 MYOTQ9UBF9 498 aa13.97□□□□□ -0.17
VAPA-209ENST00000585042 ZNF223Q9UK11 482 aaPredicted RBP13.97□□□□□ -0.17
VAPA-209ENST00000585042 F8P00451 2351 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 NPEPPSL1A6NEC2 478 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 A8MVJ9 347 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 CCDC188H7C350 402 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 CYR61O00622 381 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 ERI3O43414 337 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 IGFBP2P18065 325 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 SAT1P21673 171 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 HNRNPH1P31943 449 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 MTTPP55157 894 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 POU4F1Q01851 419 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 TLE4Q04727 773 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 TGM3Q08188 693 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 TESK1Q15569 626 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 TGFBIQ15582 683 aa13.96□□□□□ -0.17
VAPA-209ENST00000585042 HP1BP3Q5SSJ5 553 aaPredicted RBP13.96□□□□□ -0.17
VAPA-209ENST00000585042 TRIM40Q6P9F5 258 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms