RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RGS9BPQ6ZS82 235 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SHFQ7M4L6 423 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SPATA2LQ8IUW3 424 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SYCE1Q8N0S2 351 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MMP21Q8N119 569 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CADM3Q8N126 398 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 C9orf106Q8NAJ2 232 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PPFIBP2Q8ND30 876 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RAB7BQ96AH8 199 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MOB3AQ96BX8 217 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DTNBP1Q96EV8 351 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PGM2Q96G03 612 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF599Q96NL3 588 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM237Q96Q45 408 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 OR2A14Q96R47 310 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ERGIC2Q96RQ1 377 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 URM1Q9BTM9 101 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNK15Q9H427 330 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CWH43Q9H720 699 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 AGPAT3Q9NRZ7 376 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC22A11Q9NSA0 550 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ABCC13Q9NSE7 274 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 IL36RNQ9UBH0 155 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RNF14Q9UBS8 474 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RRP15Q9Y3B9 282 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 A4D1N5 150 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KPNA7A9QM74 516 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 GPR89AB7ZAQ6 455 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 NPIPB11E5RHQ5 1161 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SPINT2O43291 252 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MED24O75448 989 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIM16O95361 564 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 NR3C1P04150 777 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 GPR89BP0CG08 455 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF883P0CG24 379 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PRKAR1AP10644 381 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PRG2P13727 222 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ITGA3P26006 1051 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ZFP36P26651 326 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 WNT5AP41221 380 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CSNK1DP48730 415 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SMSP52788 366 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PDX1P52945 283 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 GAS1P54826 345 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PEX3P56589 373 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 YBEYP58557 167 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RPL26P61254 145 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SSBP2P81877 361 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 BST2Q10589 180 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ETFDHQ16134 617 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 UPP1Q16831 310 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TAF1BQ53T94 588 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM46CQ5VWP2 391 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM198Q66K66 360 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 C11orf63Q6NUN7 778 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM171BQ6P995 826 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 LINC00696Q6ZRV3 163 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 LPCAT2Q7L5N7 544 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HPS6Q86YV9 775 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MAP7D3Q8IWC1 876 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KIRREL3Q8IZU9 778 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FBXL14Q8N1E6 418 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM35BQ8NCS4 154 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PIBF1Q8WXW3 757 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PSMG2Q969U7 264 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJC19Q96DA6 116 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 OTUB1Q96FW1 271 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PAGE5Q96GU1 130 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PPP1R13BQ96KQ4 1090 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TRMT61BQ9BVS5 477 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM49AQ9H0Q0 323 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RAB17Q9H0T7 212 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TSPYL1Q9H0U9 437 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RIBC2Q9H4K1 309 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PRORYQ9H606 182 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CSNK1G1Q9HCP0 422 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 XPNPEP1Q9NQW7 623 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PDGFCQ9NRA1 345 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ZCCHC3Q9NUD5 404 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 OR6C3Q9NZP0 311 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 NDUFA13Q9P0J0 144 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 UVRAGQ9P2Y5 699 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 IL19Q9UHD0 177 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ATP6V1HQ9UI12 483 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 STOML2Q9UJZ1 356 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DUSP12Q9UNI6 340 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RPL26L1Q9UNX3 145 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SCML2Q9UQR0 700 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 LOXL2Q9Y4K0 774 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 A0A0C4DFX4 3053 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 EPG5Q9HCE0 2579 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TNRC6BQ9UPQ9 1833 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RPS10-NUDT3A0A1W2PQS6 291 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 WDR27A2RRH5 827 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ARL5CA6NH57 179 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 BECN2A8MW95 431 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 M0QZ24 198 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DVL1O14640 695 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MAP2K7O14733 419 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PFDN6O15212 129 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms