RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 LIPJQ5W064 366 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 VITQ6UXI7 678 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 PRSS48Q7RTY5 328 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 LRRTM4Q86VH4 590 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 SLC15A4Q8N697 577 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ARL6Q9H0F7 186 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ADAM7Q9H2U9 754 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 DPEP2Q9H4A9 486 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 VIRMAQ69YN4 1812 aaKnown RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 SOCS2O14508 198 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 CRISP1P54107 249 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 SNTB2Q13425 540 aaKnown RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 RAB11FIP2Q7L804 512 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 FAM86B1Q8N7N1 296 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 GDPD1Q8N9F7 314 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 PEBP4Q96S96 227 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 MCHR1Q99705 422 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 DPCDQ9BVM2 203 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 TMEM248Q9NWD8 314 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 GSKIPQ9P0R6 139 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 TAC3Q9UHF0 121 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 GLS2Q9UI32 602 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 LAMP5Q9UJQ1 280 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ATRNL1Q5VV63 1379 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 SHPRHQ149N8 1683 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 SCDO00767 359 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 WASP42768 502 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 PIGFQ07326 219 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 CD47Q08722 323 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.59□□□□□ -0.396e-6■■■■□ 22.6
RNF43-208ENST00000584437 UGT2A3Q6UWM9 527 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 FANK1Q8TC84 345 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 JPH3Q8WXH2 748 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 DGAT2Q96PD7 388 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 RGCCQ9H4X1 137 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 WDR26Q9H7D7 661 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 SCML2Q9UQR0 700 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 A0A1B0GVI7 797 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 HTR3EA5X5Y0 456 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 NDUFS4O43181 175 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 GTF2F2P13984 249 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 HSD3B1P14060 373 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 HSD3B2P26439 372 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 RHCGQ9UBD6 479 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 CDC14AQ9UNH5 594 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 DLGAP4Q9Y2H0 992 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 WDR45Q9Y484 360 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 SLIT2O94813 1529 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 TTC34A8MYJ7 566 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 NPIPA5E9PKD4 350 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 KDELR3O43731 214 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 SNNO75324 88 aaPredicted RBP12.58□□□□□ -0.4
RNF43-208ENST00000584437 ITGA5P08648 1049 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 CKMT1AP12532 417 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 CD1DP15813 335 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
RNF43-208ENST00000584437 ACVRL1P37023 503 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 NTRK2Q16620 822 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 COL28A1Q2UY09 1125 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 TMEM69Q5SWH9 247 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 PLEKHS1Q5SXH7 462 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 DEFB132Q7Z7B7 95 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 OR2T33Q8NG76 320 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 OR10T2Q8NGX3 314 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 HERVK_113Q902F9 699 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 DHRS1Q96LJ7 313 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 IL36AQ9UHA7 158 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 NPIPA1Q9UND3 350 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 ARVCFO00192 962 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 HSPA12AO43301 675 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 TLL1O43897 1013 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 SMPD1P17405 629 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 SLC6A9P48067 706 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 BLKP51451 505 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 HERV-K104P61576 105 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 IRF5Q13568 498 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 SLC39A4Q6P5W5 647 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 CDHR3Q6ZTQ4 885 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 ABHD11Q8NFV4 315 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 OR5P2Q8WZ92 322 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 NSMAFQ92636 917 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 SLC38A3Q99624 504 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
RNF43-208ENST00000584437 TMEM185BQ9H7F4 350 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 GRHPRQ9UBQ7 328 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 KCTD3Q9Y597 815 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 VILLO15195 856 aa12.58□□□□□ -0.4
RNF43-208ENST00000584437 PRAMEF11O60813 436 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms